Pairwise Alignments

Query, 376 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 73.6 bits (179), Expect = 9e-18
 Identities = 76/297 (25%), Positives = 123/297 (41%), Gaps = 16/297 (5%)

Query: 10  LAAGAAAALGGFGIARAQGETPLVLGQSAPFTGPSAQLGIQFNQGAKLFLDQYNAQPG-- 67
           LA   A ALG     +A     + +G + P TG +A  G Q+ +GA+   D+ NA  G  
Sbjct: 11  LALAVATALGVSSYVQAD----VKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVN 66

Query: 68  RRNLVIKNLDDGYEPDRCAANTQKFIEED-VFALFGYIGTPTSLAALPLAVKDKVPFIAP 126
              +V+   DD  EP +  A   + +++D V  + G+  +  ++ A  +  +  V  I P
Sbjct: 67  GEKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITP 126

Query: 127 VTGAMALREPFQKNVFHLRASYDDETAMVVKQ--LTNLGLKKIAVFQQNDAYGKAGLDGV 184
            +    + E     +F +    DD+  +V     +  L  KK+AV    D YG+   D  
Sbjct: 127 GSTNPQVTERGLSAMFRM-CGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADAT 185

Query: 185 TAALAQQSLKPVALATVERNSVDVAQAVKTIVAARPDAVVQVSAYKSCAAFIREARKAGY 244
            A L ++ +KPV    + R   D +  V  I +   D V     +      +R+ R+ G 
Sbjct: 186 KAQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQGL 245

Query: 245 GGTFFNLSFVGTQALADELGKEAAGVMVTQVVPSPYNPANAL---TREFTEAVRKAG 298
               F +S  G   + DEL   A G      V   +     L   ++   E  RKAG
Sbjct: 246 KDVKF-MSDDG--IVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAG 299