Pairwise Alignments

Query, 245 a.a., Murein hydrolase activator NlpD from Variovorax sp. SCN45

Subject, 262 a.a., metallopeptidase, M23B subfamily from Pseudomonas putida KT2440

 Score =  159 bits (403), Expect = 4e-44
 Identities = 93/239 (38%), Positives = 132/239 (55%), Gaps = 17/239 (7%)

Query: 24  TTTKAPVAGPGEYVVQPGDTLYRIASRTGRTPGEIARWSNLQDPDRLEAGQVLRVAPPGG 83
           T  K P    G+Y+V+PGDTL+ IA R G    E+A  + +Q P  +  GQ +R +    
Sbjct: 24  TVPKRPAVTSGQYIVKPGDTLFSIAFRYGWDYKELAARNGIQAPYTIRPGQAIRFSSGSS 83

Query: 84  A-----SAPSADASAPPPPPP-------RADRPRPPPPRPAAREPDPVVPPAARRS--DW 129
           +     S+PS+ +       P        A   +P    P+A  P     PAA R+   W
Sbjct: 84  SRTTVVSSPSSSSRTTVTRRPVGSTATAPASTSKPATSAPSAPAPVVATVPAAERAVGGW 143

Query: 130 GWPAQGQVVAGF--NGSSNKGIDIGGNTGDPVVSIGNGSVAVTET-LRGYGSVLMVDHGG 186
            WPA G ++  F  NGS NKGIDI G+ G PV +  +G+V    + LRGYG ++++ H  
Sbjct: 144 TWPANGVLIGKFASNGSLNKGIDIAGDLGQPVFAASDGAVVYAGSGLRGYGELIIIKHSD 203

Query: 187 SYMSVYTNVRSVLVKQGQRVQRGQKIAEIGGADAGHPKLHFEIRYRGKAVDPRQYLPAR 245
           +Y+S Y + R +LV++GQ+V+ GQ IAE+G       KLHFEIR +GK VDP Q+LP R
Sbjct: 204 TYVSAYGHNRRLLVREGQQVKAGQSIAEMGSTGTDRVKLHFEIRRQGKPVDPLQFLPRR 262