Pairwise Alignments

Query, 245 a.a., Murein hydrolase activator NlpD from Variovorax sp. SCN45

Subject, 251 a.a., putative lipoprotein (VIMSS) from Escherichia coli BW25113

 Score =  146 bits (369), Expect = 3e-40
 Identities = 88/241 (36%), Positives = 129/241 (53%), Gaps = 15/241 (6%)

Query: 9   GAGIALIAALTLAACTTTKAPVAGP---GEYVVQPGDTLYRIASRTGRTPGEIARWSNLQ 65
           G  + L   L LA C+ +K+   G      Y V+ GDTLYRI+  TG +  E+AR + + 
Sbjct: 12  GIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTVKRGDTLYRISRTTGTSVKELARLNGIS 71

Query: 66  DPDRLEAGQVLRVAPPGGASAPSADASAPPPPPPRADRPRPPPPRPAAREPDPVVPPAAR 125
            P  +E GQ L++   GGA + S    +      +          P++  P    PP  +
Sbjct: 72  PPYTIEVGQKLKL---GGAKSSSITRKSTAKSTTKT-----ASVTPSSAVPKSSWPPVGQ 123

Query: 126 RSDWGWPAQGQVVAGFNGSS--NKGIDIGGNTGDPVVSIGNGSVA-VTETLRGYGSVLMV 182
           R  W WP  G+V+  ++ +   NKGIDI    G P+ + G G V  V   LRGYG+++M+
Sbjct: 124 RC-WLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYAAGAGKVVYVGNQLRGYGNLIMI 182

Query: 183 DHGGSYMSVYTNVRSVLVKQGQRVQRGQKIAEIGGADAGHPKLHFEIRYRGKAVDPRQYL 242
            H   Y++ Y +  ++LV  GQ V+ GQKIA +G  DA   +LHF+IRYR  A+DP +YL
Sbjct: 183 KHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGSTDAASVRLHFQIRYRATAIDPLRYL 242

Query: 243 P 243
           P
Sbjct: 243 P 243