Pairwise Alignments

Query, 405 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 386 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 97.4 bits (241), Expect = 6e-25
 Identities = 77/271 (28%), Positives = 137/271 (50%), Gaps = 39/271 (14%)

Query: 1   MKKNFLISALALGVALCATAPAALAQAEPGLTDKTIKIGMFSPMSGASMNYGFDVINAAK 60
           M +   ++ALA  + L  TA AA           TIKIG+  P++GA    G  V+N AK
Sbjct: 3   MSRRTTLAALAFSL-LAGTAFAA----------DTIKIGVNEPLTGAFAASGTYVVNGAK 51

Query: 61  MYYDKINKEGGVNGRKIELVVEDDRCNANDLLAAVKKLTEQDQVFLLNGGSCSAAVVGAR 120
           +  D+IN +GG+ G+K+ELV+ED++ N  +  +  +KL   D+V +L G   S+  +   
Sbjct: 52  IAADEINAKGGILGKKVELVIEDNKSNPTEAASVAEKLITSDKVPVLMGAWGSSLTLATM 111

Query: 121 EYVERAKIPLVM-------LNASGDGALY---PPSKYIYGAFSISQHAVGGSMVQFASEH 170
             +E   +P+++       +  SG+  ++   PPS     AF  S   +G   V F    
Sbjct: 112 PKLEEYSVPMLVETSSSGKITTSGNPFIFRISPPSSVEAEAFEPSVKKLGLKKVDFL--- 168

Query: 171 LKAKKIGYINHDDAYGGWNLESAQAQAKAL--GGIDL-QVQSVNPNITDVTAPMLKIKAA 227
                   IN+D     W   +A   +K L   G+++  V++++ +  D++A + K+KA+
Sbjct: 169 -------VINND-----WGRGAAADFSKMLKANGVEVGLVETMDQSAQDMSAQLAKLKAS 216

Query: 228 NPDVLLLTTYARPVSLIVKRAFELGFNKPIV 258
           + D +++T+    ++L+ K+   LG  K I+
Sbjct: 217 DADTIMVTSAVDQLTLLFKQMAALGLKKRII 247