Pairwise Alignments

Query, 405 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 415 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score =  107 bits (267), Expect = 6e-28
 Identities = 100/390 (25%), Positives = 176/390 (45%), Gaps = 32/390 (8%)

Query: 2   KKNFLISALALGVALCATAPAALAQAEPGLTDKTIKIGMFSPMSGASMNYGFDVINAAKM 61
           ++  L    A GV L A+     AQA+      TI+IG  +P++G       D + +A++
Sbjct: 14  RRTVLAGLGAAGVGLIASPAIVRAQAD------TIRIGFPTPLTGPFGAEAKDQVKSAEL 67

Query: 62  YYDKINKEGGVNGRKIELVVEDDRCNANDLLAAVKKLTEQDQVFLLNGGSCSAAVVGARE 121
               +N +GG+ GRK+EL+V DD+ NA +      +L E+D+V  + G   SA  +   E
Sbjct: 68  AVKLVNDKGGIAGRKVELLVRDDKLNAGEAATRTLELIEKDKVHAVVGALSSAVQLAVNE 127

Query: 122 YVERAKIPLVMLNASGD-GALYPPSKYIYGAFSISQHAVGGSMVQFASEHLKAKKIGYIN 180
                 +  V ++ S     +   SKY +   +++ H    ++ +  +   K  K+  + 
Sbjct: 128 VTRARGVIYVSISQSDTINEVKDFSKYTFHE-ALNPHMTTAAVAR--ATFKKGSKVALLG 184

Query: 181 HDDAYGGWNLESAQAQAKALGGIDLQVQSVNP-NITDVTAPMLKIKAANPDVLLLTTYAR 239
            D AYG   +   +  A  LG  ++  + ++P    D +  M +I++  PD+L +  + R
Sbjct: 185 ADYAYGHEMMRGFKRAAGELGA-EIVGEILHPFGAADYSTLMPRIRSLKPDILAICNFGR 243

Query: 240 PVSLIVKRAFELGFNKPIVLAVNSTADLKQLVENVGNKDAFKNV-----YIQEVLADVPG 294
             +  +K+A + G  K + + V      +++       D F+ +     Y   +   +P 
Sbjct: 244 DQANSIKQANDFGMKKQMQIVVPVLLHNQRIAV---APDVFEGIIGGANYYWALENTIPS 300

Query: 295 GPKLKWVYDMYKAAYPDLASKPGHPQAYMPYGIPPAMAVVNALKAAGPNPTREKVLAALS 354
               K   D YKAAY  L      P  Y  YG     A++ A+  AG   T +KV+ AL 
Sbjct: 301 A---KAFNDAYKAAYGSL------PTDYGAYGFTGVSALLLAMAKAGGTDT-DKVVEALE 350

Query: 355 TMKFDSGVMAGPIEFGPDDRAAQESAIYIK 384
            +K+D  V  GP  F   D  + +S + +K
Sbjct: 351 GLKYD--VAKGPQYFRKCDHQSVQSVLVLK 378