Pairwise Alignments

Query, 405 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 370 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

 Score = 77.8 bits (190), Expect = 5e-19
 Identities = 97/385 (25%), Positives = 159/385 (41%), Gaps = 36/385 (9%)

Query: 1   MKKNFLISALALGVALCATAPAALAQAEPGLTDKTIKIGMFSPMSGASMNYGFDVINAAK 60
           MKK F   A+A    L   APA  AQ         I IG  + +SG       + I  ++
Sbjct: 1   MKKTFTSCAVAF--LLATGAPAVSAQ---------ILIGQSADLSGPVAASVKETIMGSQ 49

Query: 61  MYYDKINKEGGVNGRKIELVVEDDRCNANDLLAAVKKLTEQDQV--FLLNGGSCSAAVVG 118
           +  D +N +GG+NG +IE++  DD  +A   L   + L E  +V   LLN G+ +   V 
Sbjct: 50  LVIDAVNAQGGINGEQIEVIRMDDGLDAKRSLENTRVLIEDKKVVALLLNRGTPNTLAV- 108

Query: 119 AREYVERAKIPLVMLNASGDGALYPPSKYIYGAFSISQHAVGGSMVQFASEHLKA---KK 175
               +++  + LV  +        P  K I+   S  Q        + A +HL+    ++
Sbjct: 109 -IPLLDKYGVALVGPSTGAMALHKPLQKNIFNVRSTYQRE-----AEKAVQHLQTTGIQR 162

Query: 176 IGYINHDDAYGGWNLESAQAQAKALGGIDLQVQSVNPNITDVTAPMLKIKAANPDVLLLT 235
           I  +  DD++G   +E A    +  G   + V   + N  D  A + ++  +N   +L  
Sbjct: 163 IAVVQADDSFGKDAMEGANKGFEKAGLKPVVVALADRNKPDYGAIVPQLTKSNAQAVLWI 222

Query: 236 TYARPVSLIVKRAFELGFNKPIVLAVNSTADLKQLVENVGNKDAFKNVYIQEVL--ADVP 293
                V+  +K     G    I+   N+ A     ++ +G+  A   V I +VL      
Sbjct: 223 GSGTAVTDGIKALRAAGSAAQIITLSNNAA--SGFIKELGSASA--GVIITQVLPYERAM 278

Query: 294 GGPKLKWVYDMYKAAYPDLASKPGHPQAYMPYGIPPAMAVVNALKAAGPNPTREKVLAAL 353
           G P +K    + KA   +  S        +  G      +V AL+  GP PTR K++A L
Sbjct: 279 GHPLIKEAATLAKAKGQNELSPA------LLEGFVATKVMVEALRRTGPKPTRAKLIATL 332

Query: 354 STMKFDSGVMAGPIEFGPDDRAAQE 378
           +  ++D G     I + P D    E
Sbjct: 333 NNFQYDLG-PGLDISYSPTDHTGIE 356