Pairwise Alignments

Query, 300 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 287 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  122 bits (307), Expect = 7e-33
 Identities = 92/281 (32%), Positives = 145/281 (51%), Gaps = 5/281 (1%)

Query: 15  LSGIVTGSVYALLAVAIVMVFKTTDVPNFSQGEIFMAGGYAALFPLVVWGWPYWGAVLAS 74
           L+G+VTG + AL A+A+ +VF      NF+ G     G YAA    VV G P   A   +
Sbjct: 7   LNGLVTGLLLALPALALTLVFGILRFANFAVGAFLTLGAYAAYTANVVLGLPLPIAAAVA 66

Query: 75  IAVTALLAALFQRVVMQRVTASRGVGVQLVIATLGFAYLLKGLVRKTGLGDTPRSLPSLV 134
            A  AL + +   +V +R+   RG  + L++A++G + +++ + R    G+  RS    V
Sbjct: 67  AATVALASLIADALVFERLRM-RG-SITLLVASMGVSLVVENICRFI-FGNAARSFDLAV 123

Query: 135 PQDPIMIGQASLTLLDLAIFGSAVVVMVLLYLMFTRTRTGQAMRAVGMNPRGAQIVGVKL 194
            + PI      +    L   G  V+ +VLL+L+ T +  G+AMRAV  N   A + GV+ 
Sbjct: 124 AR-PIRWNGLRINHEQLITAGVVVIALVLLHLLITASPLGRAMRAVADNASLAAVRGVER 182

Query: 195 GSIRMKIWALTGVISAISALLITPKILITPDIG-HIAILAYAAAIVGGFTSLPGAVVGGF 253
            +I    +ALTG +  ++ +L      I P +G +  I  +AAAI+GG  S  GAV G  
Sbjct: 183 RTIARITFALTGALIGLAGVLAGLDRAIDPLMGWNYQIPIFAAAILGGLGSPIGAVAGAL 242

Query: 254 IIGIVENLVGLFISSNAIVVAPFVAIMVVLLVRPQGLLGGK 294
           +IG+ E +  L +  +   +  F  I+++LL R  GL G K
Sbjct: 243 LIGVAEEMSALILPVSFRQIVSFGVILLLLLFRANGLFGAK 283