Pairwise Alignments

Query, 300 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 306 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  110 bits (275), Expect = 4e-29
 Identities = 84/297 (28%), Positives = 155/297 (52%), Gaps = 17/297 (5%)

Query: 12  QGVLSGIVTGSVYALLAVAIVMVFKTTDVPNFSQGEIFMAGGYAA------LFPLVVWGW 65
           Q + +G++ G++YA++AV   + F   DV  FS G++   G ++A      +  LV    
Sbjct: 8   QYLFNGLMLGTIYAIVAVGFSLFFGVLDVIKFSHGDVVTVGAFSAFGAAGLMAALVTLSG 67

Query: 66  PYWGAV--LASIAVTALLAALFQRVVMQRVTASRGVGVQLVIATLGFAYLLKGLVRK-TG 122
           P   AV  +A++   AL   +  R+++  +      GV +++ATL    +L+  +R    
Sbjct: 68  PLALAVGLIAALGAGALSGVIIGRLLV--LPLKNAPGVNVLLATLMAGTVLREAIRLGVP 125

Query: 123 LGDTPRSLPSLVPQDPIMIGQASLTLLDLAIFGSAVVVMVLLYLMFTRTRTGQAMRAVGM 182
            G  P+  P+L+P   +  G  S+ +  + I  + + V++  +L+ TRTR G ++RAV  
Sbjct: 126 NGGNPKPFPALLPDGVLKAGSFSVGVDSVIILLAGLAVVLATHLVITRTRLGLSIRAVAQ 185

Query: 183 NPRGAQIVGVKLGSIRMKIWALTGVISAISALLITPKIL-ITPDIG-HIAILAYAAAIVG 240
           +   AQ+ GV      +  +AL  +++ ++ L++      I  ++G  + I+ +A A+VG
Sbjct: 186 DEEVAQLAGVSFNRTVLGTFALGSMLAGLAGLMLGLYYREINFNMGVMLGIIGFACAVVG 245

Query: 241 GFTSLPGAVVGGFIIGIVENLVGL---FISSNAIVVAPFVAIMVVLLVRPQGLLGGK 294
           G  SL G ++GGF+   V+ LV +   F S+   VVA F  I+ ++ + P GL+  K
Sbjct: 246 GLGSLIGPIIGGFLFAGVQTLVTVVLPFTSAYKDVVA-FAVIIALIGLFPTGLIAEK 301