Pairwise Alignments

Query, 300 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  146 bits (369), Expect = 5e-40
 Identities = 91/282 (32%), Positives = 154/282 (54%), Gaps = 5/282 (1%)

Query: 12  QGVLSGIVTGSVYALLAVAIVMVFKTTDVPNFSQGEIFMAGGYAALFPLVVWGWPYWGAV 71
           Q  L+GI  G +Y  +AV   +++ ++ V NF+QGE  M G    +  L+  G PY  A 
Sbjct: 6   QFALAGISVGVIYGAIAVGFNIIYNSSHVVNFAQGEFVMLGAMTCVL-LLGAGLPYPLAA 64

Query: 72  LASIAVTALLAALFQRVVMQRVTASRGVGVQLVIATLGFAYLLKGLVRKTGLGDTPRSLP 131
             ++A TA++  L   V ++   A     + L+I T+G + L++GL R    G    SLP
Sbjct: 65  FLAVAATAVVGLLLYDVAIR--PAKNAPVIMLIIITIGASILIRGLARPI-FGTGVASLP 121

Query: 132 SLVPQDPIMIGQASLTLLDLAIFGSAVVVMVLLYLMFTRTRTGQAMRAVGMNPRGAQIVG 191
           ++VP   I IG A +    L +    +  ++LL+L   +T  G+ + A   +P  A ++G
Sbjct: 122 AVVPGASISIGGAVVQPQSLIVVAGTLGAVLLLWLFMRKTLLGKGLIAASSDPMAATLMG 181

Query: 192 VKLGSIRMKIWALTGVISAISALLITPKILITPDIGHI-AILAYAAAIVGGFTSLPGAVV 250
           +++ +I    + ++  + A+S +LI P  L   ++G + A+  +AAAI+GG  S+PGAV+
Sbjct: 182 IRVSNIVRLSFLISASLGAVSGILIAPIALANYEMGTLLALKGFAAAILGGMGSIPGAVL 241

Query: 251 GGFIIGIVENLVGLFISSNAIVVAPFVAIMVVLLVRPQGLLG 292
           GG ++G+ E +   +ISS+      FV IM+ L   P GL+G
Sbjct: 242 GGLLVGLSEAMSAGYISSDYKDATAFVVIMLALFFFPNGLVG 283