Pairwise Alignments

Query, 300 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 295 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  129 bits (323), Expect = 1e-34
 Identities = 83/286 (29%), Positives = 155/286 (54%), Gaps = 16/286 (5%)

Query: 14  VLSGIVTGSVYALLAVAIVMVFKTTDVPNFSQGEIFMAGGYAALFPLVVWGWPYWGAVLA 73
           +L G++ G+ YA+L++ + ++F   ++ NFS G ++M G + A   L   G  YWGA++ 
Sbjct: 16  LLLGLINGAFYAMLSLGLALIFGLLNIINFSHGALYMMGAFVAWLALNFLGLGYWGALIV 75

Query: 74  SIAVTALLAALFQRVVMQRVTASRGVGVQLVIATLGFAYLLKGLVRK-TGLGDTPRSLPS 132
           +  V AL+  + +R ++ R+   +   +  ++ T G A +++GL R+  G+   P S+PS
Sbjct: 76  APLVVALVGIVIERTMLCRL--YKLDHLYGLLLTFGLALIIEGLFREGYGVSGQPYSVPS 133

Query: 133 LVPQDPIMIGQASLTLLDLAIFGSAVVVMVLLYLMFT-----RTRTGQAMRAVGMNPRGA 187
                  + G  +L  + L I+   VVV  L+  + T     +T+ G  +RA   NP   
Sbjct: 134 ------ALAGGWNLGFMFLPIYRGWVVVASLVLCLGTWYAIEKTKLGAYLRAGTENPTLV 187

Query: 188 QIVGVKLGSIRMKIWALTGVISAISALLITPKILITPDIG-HIAILAYAAAIVGGFTSLP 246
           Q  G+ +  +    +     ++AI+ +L  P   ++P +G  + I+ +A  ++GG  S+ 
Sbjct: 188 QAFGINVPLMITLTYGFGVALAAIAGVLAAPIYQVSPKMGSDLIIVVFAVVVIGGMGSIM 247

Query: 247 GAVVGGFIIGIVENLVGLFISSNAIVVAPFVAIMVVLLVRPQGLLG 292
           G+++ G+++GIVE L  +F    A  V  F+ ++VVLL++P GL G
Sbjct: 248 GSILTGYMLGIVEGLTKVFYPEAASTVI-FMVMVVVLLIKPAGLFG 292