Pairwise Alignments

Query, 279 a.a., Phytoene synthase (EC 2.5.1.32) from Variovorax sp. SCN45

Subject, 286 a.a., squalene synthase HpnD from Magnetospirillum magneticum AMB-1

 Score =  159 bits (403), Expect = 5e-44
 Identities = 100/274 (36%), Positives = 141/274 (51%), Gaps = 9/274 (3%)

Query: 1   MNPEQY--VQDKAAASGSSFYYAFLFLPKPRRAAITAFYAFCREVDDVVDEVSDPGVAAT 58
           ++P QY  V +   ASGSSFY+    L +PRR A+ A YAFCR VDD+ DE  DP V   
Sbjct: 8   IDPAQYDMVAEIVRASGSSFYWGMRLLDRPRRYAMYAIYAFCRVVDDIADEPGDPEVKRA 67

Query: 59  KLAWWRTEVAQSFAGTPRHPVMQALMPHAAAYRIEARQLNEVIDGCQMDLH-QTRYLDFP 117
           +LA WR E+ + +AG P H V +AL      Y +       VI GC+ D   +   L   
Sbjct: 68  QLAEWRVELDRLYAGAPTHAVAKALHGPVLQYNLPKEDFLAVIAGCESDAQPEVTRLSMA 127

Query: 118 GLSRYCHLVAGVVGEVAARIFGQTDPQTTAYAHKLGLALQLTNILRDVGEDALRGRIYLP 177
            L  YC  VA  VG ++ R+FG   P++   A+  G+ALQLTNILRDV  DA  GR+YLP
Sbjct: 128 ELELYCDRVACAVGRLSIRVFGPLRPKSIETANATGMALQLTNILRDVAVDAKIGRLYLP 187

Query: 178 VNELQKFDVKAHEILNRVHSDRFVTLMK--FQAARAH-VAYDEALALLPLADRRAQKPGL 234
              L K  + + + +  +     V + +   + AR + +A D   A    AD R   P  
Sbjct: 188 DELLSKHGIASRDPMEVLAHPNLVAVCRELGETARGYFLASDAGQAECSRADMR---PAT 244

Query: 235 MMASIYRTLLREIERDDFQVLNQRVSLTPVRKFW 268
           +M  +YR +   +E + F   +  V ++   K W
Sbjct: 245 LMKEMYREIFTRVEAEGFVPRDPPVKVSKAFKLW 278