Pairwise Alignments

Query, 316 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 324 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  174 bits (442), Expect = 2e-48
 Identities = 108/316 (34%), Positives = 162/316 (51%), Gaps = 11/316 (3%)

Query: 2   DPLSDVLSMLTVSSTLSSRFEARGRWAFRYSQYASHIKLGCVLTGRFQLHVDGAAVPVVL 61
           DPL+ ++++L   + LS      G WA +Y  Y        ++ G   L +D A  P ++
Sbjct: 8   DPLASIVALLRPQTVLSKFVSGAGSWAVQYPSYGQP-SFCLMVQGSCWLRLDSAD-PFLM 65

Query: 62  EAGDFFLL--TNGLPFSASSDPPGPLRDGTQLNRDHRGPDGVLRYDGQGAQDGPLVVLAS 119
           E GD+ LL  T GL   +  +      D   +      P G +R+  Q  +D   V +  
Sbjct: 66  EPGDYVLLPATPGLRMGSDLEA----MDRPAMRIAEASPAGEVRHGTQ--EDEAAVRMLG 119

Query: 120 GRFALTGEAGELLLRHLPPLIHLRASDPGATPLRGLLDLLGWETAEPRPGASIAQTHLAA 179
           G F     +  LL+  LP ++H++A+D GA  L  +   +G E+  PRPG     T L  
Sbjct: 120 GYFLFDPTSAPLLVGLLPMVVHIKAADSGAARLSWIARAIGEESMTPRPGGDAILTRLVE 179

Query: 180 LVLVQALRVHLANAPQP-EGWLGAMTDARIGEALSRMHGDIAQPWTVERLAQSAGMSRTA 238
           ++L++ALR   A    P  G L  + D R+  AL  +H D+A+ WT+E LA   GMSR A
Sbjct: 180 IMLIEALRWQPAQDAAPISGLLAGLADPRMANALRLIHEDVARRWTIEDLASKVGMSRAA 239

Query: 239 FAVRFKTLTGTTPLDYLGGWRMTVARNALRHSDEAIARIAERIGYQSETAFSAAFRRMVG 298
           FA RF  + G  P++Y+  WRM +A++ L H   ++  +A  +GYQS +AFSAAF R VG
Sbjct: 240 FAARFTQILGAPPMEYVLRWRMALAKDMLWHDGLSLGEVAHAVGYQSASAFSAAFSRSVG 299

Query: 299 ESPGRFRTLSRSERSA 314
            SP  F    R++  A
Sbjct: 300 LSPSAFARTGRADPPA 315