Pairwise Alignments

Query, 251 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 255 a.a., leucine/isoleucine/valine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  176 bits (447), Expect = 3e-49
 Identities = 99/249 (39%), Positives = 149/249 (59%), Gaps = 7/249 (2%)

Query: 3   LFRIEGLVKRFGGLLATDHVNLTVERGEVHALIGPNGAGKTTLVNLITGLLKADAGRLLL 62
           L  + GL+ RFGGLLA ++VNL +   E+ +LIGPNGAGKTT+ N +TG  K   G +LL
Sbjct: 5   LLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILL 64

Query: 63  DEKDITSLKDHQRVAAGMSRCFQVTRVFAKETVHDNLMLAAQAHAGSS-----LRFMAPR 117
            ++ +  L   Q    G+ R FQ  R+F + TV +NL++A      +      L+  + R
Sbjct: 65  RDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPSFR 124

Query: 118 AKEHDLIDRAVALADRVGLGGERDRIAGTLPHGAQRALDVALALAAEPKLLLLDEPMAGM 177
             + + +DRA    +R+GL    +R A  L +G QR L++A  +  +P++L+LDEP AG+
Sbjct: 125 RAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPAAGL 184

Query: 178 GPDESARMVELIESLR--ASMAILLIEHDMDAVFRLANRLTVLVQGKVLMSGTADEVRGH 235
            P E+  + ELI  LR   +  ILLIEHDM  V  +++R+ V+ QG  L +GT +++R +
Sbjct: 185 NPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQIRNN 244

Query: 236 PDVQAVYLG 244
           PDV   YLG
Sbjct: 245 PDVIRAYLG 253