Pairwise Alignments

Query, 329 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  156 bits (394), Expect = 8e-43
 Identities = 116/317 (36%), Positives = 163/317 (51%), Gaps = 18/317 (5%)

Query: 16  VLLAAFPLIAPLFGLE-FYIGFVRRVLIVALAAASLNFILGFGGMVALGHAGFIGMGAYT 74
           V LAA  ++ PLF    FY+    +V I A+ A  LN ++G  G+ +LG A F G+ AY 
Sbjct: 10  VALAAMAMV-PLFSTSPFYVNLTSQVAIAAIGALGLNVLVGHAGLNSLGFAVFPGLTAYL 68

Query: 75  VVALSDAGVMSGWIMWPAAALVAGL-----VAALIGTVALRTRGVYFIMTTLAFAQMLYF 129
           V  LS  G +      P AA +  L     V+AL   VALRT G+ F+M T+A  Q+++ 
Sbjct: 69  VAWLSTVGGID-----PVAAALFALGGTLAVSALFALVALRTTGLGFVMITMALCQIVWG 123

Query: 130 VVVSLRRY-GGDDGYTLMSRPTLLPGLDLGNESNFYWVVLAIVALALWWLHRATRSRFGH 188
                    GGD+G + + RP     L L     F W+ L ++ALAL  L R   S  G 
Sbjct: 124 AAYRWTSVTGGDNGLSGVPRPGGA-WLPLEKPEYFLWLCLIVLALALIQLGRFFDSPLGV 182

Query: 189 ALMGIRDNETRMRALGYPVFRLQLVAFAIAGAIAGLAGALLAGGNGFVSPATMHWTQSAT 248
           AL G RD   RM A+GY V+R++ VA+ +A A    AG L A  + FVSP  M  T SA 
Sbjct: 183 ALRGTRDQPRRMGAVGYDVWRIRFVAWMLAAAWGAAAGLLYAWYHQFVSPHMMAVTASAE 242

Query: 249 LLVMVVIGGLGRSWGGPVGAVVWLVLEEVLKQHTEHWHMPLGLLLIAVALWAPKGLAALY 308
           +L+MVV GG G   G  +GA + ++L+ +     + W M LG   + + L  P G+   +
Sbjct: 243 VLLMVVAGGAGTLAGPLIGAALVVLLKNLASIWIDRWVMLLGFTFVVIVLLMPDGIVPGF 302

Query: 309 RRRLP----LTPTLSPE 321
            R       L PT +P+
Sbjct: 303 SRLTAWLKRLRPTPAPK 319