Pairwise Alignments

Query, 329 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  148 bits (374), Expect = 2e-40
 Identities = 94/319 (29%), Positives = 162/319 (50%), Gaps = 25/319 (7%)

Query: 14  LLVLLAAFPLIAPLFGLEFYIGFVRRVLIVALAAASLNFILGFGGMVALGHAGFIGMGAY 73
           ++  L    ++ P+F  ++ +  V   LI  L    LN ++G  G++ LG+  F  +GAY
Sbjct: 98  IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157

Query: 74  TVVALSDAGVMSGWIMWPAAALVAGLVAALIGTVALRTRGVYFIMTTLAFAQMLYFVVVS 133
            +        +  W + P AA+ A L   ++G   LR  G Y  + TL F +++  V+ +
Sbjct: 158 GLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217

Query: 134 LRRY-GGDDGYTLMSRPTLLPGLDLGNESN---------------------FYWVVLAIV 171
              + GG +G  + S PT L GL+ G  +                      F ++VL +V
Sbjct: 218 WLSFTGGPNGMPVPS-PTFL-GLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLV 275

Query: 172 ALALWWL-HRATRSRFGHALMGIRDNETRMRALGYPVFRLQLVAFAIAGAIAGLAGALLA 230
            LA+ ++ HR TR   G A   +R++E   R++G     ++L AF I  + AGLAG   A
Sbjct: 276 VLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFA 335

Query: 231 GGNGFVSPATMHWTQSATLLVMVVIGGLGRSWGGPVGAVVWLVLEEVLKQHTEHWHMPLG 290
              GFV+P++  + +SA +L +VV+GG+G + G  + A V  V  E+L+  +E+  +  G
Sbjct: 336 SYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFG 395

Query: 291 LLLIAVALWAPKGLAALYR 309
           +L++ + +W P+GL  + R
Sbjct: 396 VLMVVMMIWRPRGLIRISR 414