Pairwise Alignments

Query, 329 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  144 bits (364), Expect = 3e-39
 Identities = 95/330 (28%), Positives = 163/330 (49%), Gaps = 25/330 (7%)

Query: 3   TSPSRYIGLGLLLVLLAAFPLIAPLFGLEFYIGFVRRVLIVALAAASLNFILGFGGMVAL 62
           T+P     L  ++  L    ++ P+F  ++ +  V   LI  L    LN ++G  G++ L
Sbjct: 97  TAPDYKSRLRYIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDL 156

Query: 63  GHAGFIGMGAYTVVALSDAGVMSGWIMWPAAALVAGLVAALIGTVALRTRGVYFIMTTLA 122
           G+  F  +GAY +        +  W + P AA+ A L   ++G   LR  G Y  + TL 
Sbjct: 157 GYVAFYAIGAYGLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLG 216

Query: 123 FAQMLYFVVVSLRRY-GGDDGYTLMSRPTLLPGLDLGNESN------------------- 162
           F +++  V+ +   + GG +G    S PT   GL+ G  +                    
Sbjct: 217 FGEIIRLVLNNWLSFTGGPNGMPAPS-PTFF-GLEFGRRAKDGGVPIHEFFGFEYNASLK 274

Query: 163 --FYWVVLAIVALALWWL-HRATRSRFGHALMGIRDNETRMRALGYPVFRLQLVAFAIAG 219
             F + VL +V LA+ ++ HR TR   G A   +R++E   R++G     ++L AF +  
Sbjct: 275 FVFIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGA 334

Query: 220 AIAGLAGALLAGGNGFVSPATMHWTQSATLLVMVVIGGLGRSWGGPVGAVVWLVLEEVLK 279
           + AGLAG   A   GFV+P++  + +SA +L +VV+GG+G + G  + A V  V  E+L+
Sbjct: 335 STAGLAGVFFATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLR 394

Query: 280 QHTEHWHMPLGLLLIAVALWAPKGLAALYR 309
             +E+  +  G+L++ + +W P+GL  + R
Sbjct: 395 SFSEYRVLLFGVLMVLMMIWRPRGLIRISR 424