Pairwise Alignments

Query, 306 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 291 a.a., Broad-specificity amino acid ABC transporter, permease protein 1 from Variovorax sp. SCN45

 Score =  162 bits (410), Expect = 9e-45
 Identities = 97/298 (32%), Positives = 158/298 (53%), Gaps = 19/298 (6%)

Query: 6   VLEQLLNGLGYGLMLFLLAAGLTLVFGIMDVLNLAHGSLFMAGAYVAAEAHTRTGSFAAA 65
           +L QLL GL  G    +L+ GL ++FG+++V+N AHG+LFM GA +   A    G     
Sbjct: 8   LLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLTWMAMEYFGINYWV 67

Query: 66  IVIAVAVTV-VVALLLEVLLMRRLYTRDHLAQVLATFGVILVADDIVTMAWGPSPVMAPT 124
           ++IA  + + +  +L+E LL+R +Y  DHL  +L T G+ L+ + +    +G S +    
Sbjct: 68  MLIAAPIVIGIFGVLIERLLLRWIYKLDHLYGLLLTLGLTLLIEGVFRSVYGVSGLPYDA 127

Query: 125 PAALSGPVQLMDGLPYPAYRLVILAGGLLVALALYLLVNHTRIGMRVRAGASDRPMAELM 184
           P ALS    L   +  P YR  ++   L++  A + ++  TR+G  +RAG  +  + E  
Sbjct: 128 PDALSSATNL-GFMVLPNYRAWVVVASLVICFATWYVIEKTRLGAYLRAGTENPRLVEAF 186

Query: 185 GVRVGRIFNGVFLLGAALAALAGALMGPIVAVQVGMGEAILIPALVVLVIGGIGSVRGAF 244
           GV V  +    +  G ALAA AG L  P++ V   MG+ ++I    V+VIGG+GS+ GA 
Sbjct: 187 GVNVPLMITLTYAFGCALAAFAGVLAAPVMQVSPLMGQNLIIVVFAVVVIGGMGSIMGAI 246

Query: 245 VAALLVGVVDTVGRAFVPMLLRATLPPATAADLGPLFAEVAMYALMVVVLIFRPSGLF 302
           +  L +GV++   + F P                   +   ++ +MV+VL+ RP+GLF
Sbjct: 247 LTGLGLGVIEGFTKVFYPEA-----------------SSTVVFVIMVIVLLIRPAGLF 287