Pairwise Alignments

Query, 306 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 495 a.a., putative Urea ABC transporter from Pseudomonas putida KT2440

 Score =  161 bits (408), Expect = 3e-44
 Identities = 104/309 (33%), Positives = 163/309 (52%), Gaps = 26/309 (8%)

Query: 6   VLEQLLNGLGYGLMLFLLAAGLTLVFGIMDVLNLAHGSLFMAGAYVAAEAHTRTGSFAA- 64
           +L Q  +GL  G +L L A GL + FG++ V+N+AHG + M GAY           FA  
Sbjct: 199 LLGQAFSGLSLGSVLLLAALGLAITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRFAPG 258

Query: 65  --------AIVIAVAVTVVVALLLEVLLMRRLYTRDHLAQVLATFGVILVADDIVTMAWG 116
                   A+ +A AV+  V + LE  ++R LY R  L  +LAT+G+ L+    + + +G
Sbjct: 259 AIEFYPLIALPVAFAVSAGVGMALERTVIRHLYGRP-LETLLATWGISLILIQAIRLLFG 317

Query: 117 PSPVMAPTPAALSGPVQLMDGLPYPAYRLVILAGGLLVALALYLLVNHTRIGMRVRAGAS 176
              V    PA LSG +QL+  L  P  RLVI+   L V L  +LL+N TR+G+ VRA   
Sbjct: 318 AQNVEVSNPAWLSGGIQLLPNLVLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQ 377

Query: 177 DRPMAELMGVRVGRIFNGVFLLGAALAALAGALMGPIVAVQVGMGEAILIPALVVLVIGG 236
           +R MA   GV  GR+    F LG+ +A L G  +  +  V   +G++ +I + +V+V+GG
Sbjct: 378 NRNMAACCGVSTGRVDMLAFGLGSGIAGLGGVALSQVGNVGPDLGQSYIIDSFLVVVLGG 437

Query: 237 IGSVRGAFVAALLVGVVDTVGRAFVPMLLRATLPPATAADLGPLFAEVAMYALMVVVLIF 296
           +G + G+  AA  +G+ + +            L P   A LG    ++ + AL+++ +  
Sbjct: 438 VGQLAGSLWAAFGLGIANKL------------LEPQIGAVLG----KILILALIILFIQK 481

Query: 297 RPSGLFSAR 305
           RP GLF+ +
Sbjct: 482 RPQGLFALK 490