Pairwise Alignments

Query, 401 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 390 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score =  400 bits (1027), Expect = e-116
 Identities = 204/387 (52%), Positives = 268/387 (69%), Gaps = 5/387 (1%)

Query: 18  LLLCGAALGTAV---QAVAAPVKVGLALDISGPFAALGAEARDGFALGIKQLGGKLGGQD 74
           LL   A LGT      A A PVKVGL   +SGP A LG   RDGF L +K+LGGKLGGQ+
Sbjct: 6   LLASTALLGTLALSGAAAAEPVKVGLVSTLSGPSAVLGQHMRDGFLLAVKELGGKLGGQE 65

Query: 75  VEFVQADMAGSPDQAKQLVDRMIQRDKIDLFSGPIGSNVALAVGPTLFNAKVPYLSANAG 134
            E +  D    PD A Q V  +++RDK+D  +G + SNV  AV   +   +   +S NAG
Sbjct: 66  TEVIVVDDELKPDIAVQKVKGLLERDKVDFVAGVVFSNVMGAVAKPVTANETFLISGNAG 125

Query: 135 PSQFAGAQCNAYFFGTAYQNDQFHEAAGKFAQDRAFKKIVLIAPNYPAGKDALGGFKRQF 194
           PS  AGA C+ +FF  +YQNDQ HE  GK+AQD+ FKK+VLIAPNY AGKD+L GFKR +
Sbjct: 126 PSTIAGAGCSPFFFSASYQNDQNHEVLGKYAQDKGFKKVVLIAPNYQAGKDSLAGFKRYY 185

Query: 195 KGQVADELYTKLGQIDYAAELAQLRAAKPDSIYFFLPGAMGINFIKQFVGAGLSKDITLV 254
           KG+VADE+YT+LGQ+D++AELA++ AAKPD+++ F+PG MG+N +KQ+  AGL+ D T  
Sbjct: 186 KGEVADEIYTQLGQLDFSAELAKIAAAKPDAVFTFMPGGMGVNLVKQYRQAGLA-DTTPF 244

Query: 255 TSGFSADEDVIGAVGEPMLGLFNTSHWAHDLDNPANKAFVAAFRKEYNGRYPSVYAAQAY 314
            S F+ DE  + A GE  LG F+ + WA DLD PANKAFVAAF KEY G  P++YAAQ Y
Sbjct: 245 LSAFTVDETTLPATGEAALGFFSGAAWAPDLDTPANKAFVAAFEKEY-GYIPALYAAQGY 303

Query: 315 DAILAMDAAVKQSGGNAQNREAVIAALKKANYASTRGSFKYANNHYPIENFYLRVIGKDA 374
           DA   +D+A+K +GG   ++ AV AALKKA+++S RG+FK+  N +PI++FYL  +GK  
Sbjct: 304 DAAKLIDSALKATGGKTADKAAVRAALKKADFSSVRGNFKFNTNQFPIQDFYLVKVGKRP 363

Query: 375 QGKVTNKLINTVLTNYGDSYADKCPLK 401
            GKV   +   V +NYGD+YA+KC +K
Sbjct: 364 DGKVETMVQEKVFSNYGDAYAEKCDMK 390