Pairwise Alignments

Query, 401 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 412 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 74.3 bits (181), Expect = 6e-18
 Identities = 81/314 (25%), Positives = 132/314 (42%), Gaps = 23/314 (7%)

Query: 6   PKSPALPRT--LLSLLLCGAAL--------GTAVQAVAAPVKVGLALDISGPFAALGAEA 55
           P +P L R+  LL+L L  AAL           +      V VG     +G  A     +
Sbjct: 10  PMAPRLIRSTPLLALSLLAAALFSQGVLADNEGLAVTPTEVTVGQLHSATGTMAISETGS 69

Query: 56  RDGFALGIKQLGGKLG--GQDVEFVQADMAGSPDQAKQLVDRMIQRDKIDLFSGPIGSNV 113
                L I+Q+    G  G+ ++ +Q D A       +   +++  DK+    G   S  
Sbjct: 70  IQAERLAIEQINASGGILGRQIKVIQEDGASDWPTFAEKAKKLLVNDKVAAVFGCWTSAS 129

Query: 114 ALAVGPTLFNAKVPYLSANAGPSQFAGAQCNAYFFGTAYQ-NDQFHEAAGKFAQDRAFKK 172
             AV P +F  +   L     P+ + G + +     T  +   Q   +    A+ +  K 
Sbjct: 130 RKAVLP-IFEKENGLLYY---PTFYEGLEQSKNVIYTGQEATQQILASLDWIAKTKGAKT 185

Query: 173 IVLIAPNY----PAGKDALGGFKRQFKGQVADELYTKLGQIDYAAELAQLRAAKPDSIYF 228
             L+  +Y     + K A    +    G V  E Y  LG   + + + +++  KPD ++ 
Sbjct: 186 FYLVGSDYIWPRTSMKIARKHIENVLHGTVVGEDYYPLGNTQFGSLINKVKLKKPDVVFA 245

Query: 229 FLPGAMGINFIKQFVGAGL-SKDITLVTSGFSADEDVIGAVGEPMLGLFNTSHWAHDLDN 287
            + G   + F KQ   AG+ S   TL+T   + DE ++G  GE M G + +  +   LDN
Sbjct: 246 AVVGGSNVAFYKQLNAAGVNSAKQTLLTLSVTEDE-LLGIGGENMAGFYASMKYFQSLDN 304

Query: 288 PANKAFVAAFRKEY 301
           P NKAFV AF+ +Y
Sbjct: 305 PNNKAFVEAFKAKY 318