Pairwise Alignments

Query, 401 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 384 a.a., ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score = 79.7 bits (195), Expect = 1e-19
 Identities = 100/364 (27%), Positives = 162/364 (44%), Gaps = 30/364 (8%)

Query: 13  RTLLSLLLCGAALGTAVQAVAA-PVKVGLALDISGPFAALGAEARDGFALGIKQLGGKLG 71
           RT  + L   + LG A  A+AA P+K+G+ L ++G  + +G   +  F   I+++  + G
Sbjct: 5   RTAGAALAVMSGLGYAASALAADPIKIGMFLSVTGQMSPMGDPQKRTFDYMIEKINAQGG 64

Query: 72  --GQDVEFVQADMAGSPDQAKQLVDRMIQRDKIDLFSGPIGSNVALAVGPTLFNAKVPYL 129
             G+ VE V  D    P++A   V R+I  DK+DL  G  G+  ++AV   +  A+VPYL
Sbjct: 65  VLGRKVEAVIYDDGSEPEKAATFVKRLIDNDKVDLIIGGSGTPTSMAVLGLIERAEVPYL 124

Query: 130 SANAGPSQFAGAQCNAYFFGTAYQNDQFHEAAGKFAQD---RAFKKIVLIAPNYPAGK-- 184
           S   G +   G     + F    Q+D+   AA K   D   R   KI L++ N   GK  
Sbjct: 125 SLGGGTA--IGDPVRKWTFKFP-QSDRL--AAEKVLVDLKKRGLTKIALLSENVGFGKSG 179

Query: 185 -DALGGFKRQFKGQV-ADELYTKLGQIDYAAELAQLR-AAKPDSIYFFLPGAMGINFIKQ 241
            D       Q   ++  DE+Y+     D   +L ++R  A   +++ F  G       K 
Sbjct: 180 HDQTVKLAPQHGIEILIDEVYSPKDP-DVTPQLTKIRGTAGVQALFIFGTGTGPAVVTKN 238

Query: 242 FVGAGLSKDITLVTSGFSADE--DVIGAVGEPMLGLFNTSHWAHDLD-NPANKAFVAAFR 298
               GL+   T  + G ++ E   ++G   + M         A  L  N   KA   AF+
Sbjct: 239 LRQMGLNLP-TYQSHGVASKEFLRLVGTAADGMRLPAGAQAVAEQLPANDPQKAVTMAFK 297

Query: 299 KEYNGRYPSVYA----AQAYDAILAMDAAVKQSG--GNAQNREAVIAALKKANYASTRGS 352
           KEY  +   + A        DA++    A K++G    A+ R+A+    +   + +T G 
Sbjct: 298 KEYEEKNKPLEAGPLPGHGLDALMMAMDAFKRAGTTDKAKVRDAI---EQTKGFVATTGI 354

Query: 353 FKYA 356
           F Y+
Sbjct: 355 FTYS 358