Pairwise Alignments

Query, 507 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 513 a.a., fused D-xylose transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  362 bits (929), Expect = e-104
 Identities = 200/501 (39%), Positives = 307/501 (61%), Gaps = 13/501 (2%)

Query: 7   LLELKGISKRFGASRALTGVDFTLHAGEIHALCGENGAGKSTLMNIIDGI--HQPDEGET 64
           LLE+K I+K FG+ +A+  V   L+AGEI +LCGENG+GKSTLM ++ GI  H   EGE 
Sbjct: 4   LLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYEGEI 63

Query: 65  SLDGRKVVIDGPAHAMRLGIGLVHQEIALCGDATVAENIFMPEINAGKHAWMNYASLNER 124
              G ++         R GI ++HQE+AL  + TV ENIF+       +  M+Y  +  R
Sbjct: 64  IFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLGN-EITHNGIMDYDLMTLR 122

Query: 125 AARVLQRLGQDVDPAALVKDLSISTQQLIEIAKALTLDCKVLILDEPTAALTDNESAALF 184
             ++L ++   + P   V DL +  QQL+EIAKAL    ++LILDEPTA+LT+ E++ L 
Sbjct: 123 CQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETSILL 182

Query: 185 KVLHDLKAQGIGIIYISHRMAEIFAHCSRVTVLRDGRNVHCGPLAELDADALVRRMVGRD 244
            ++ DL+  GI  IYISH++ E+ A    + V+RDG+++     A +  D ++  MVGR+
Sbjct: 183 DIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDDIITMMVGRE 242

Query: 245 LGNYYPPKHGDAAHGEPVLEVSDIADG-------ERVHGVSFTLRRGEILGIAGLMGAGR 297
           L   YP +      G+ +L +  +          +RV+ VSF+L+RGEILGIAGL+GAGR
Sbjct: 243 LTALYPNEPHTT--GDEILRIEHLTAWHPVNRHIKRVNDVSFSLKRGEILGIAGLVGAGR 300

Query: 298 SELAETVCGLRTAT-RGAVRLRGRTLAIRKYSDALREGIAYLSEDRKAAGVYLDLPIAQN 356
           +E  + + G+      G + + G+ + IR    A+ +GIA + EDRK  G+   + + +N
Sbjct: 301 TETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQAIAQGIAMVPEDRKRDGIVPVMAVGKN 360

Query: 357 IASMALRRVSSRFGLLQRAAERKLALDLGGKLKLKSDGVDIDVASLSGGNQQKVAIAKLL 416
           I   AL + +     L  AAE+K  L+   +LK+K+   D+ +  LSGGNQQK  +A+ L
Sbjct: 361 ITLAALNKFTGGISQLDDAAEQKCILESIQQLKVKTSSPDLAIGRLSGGNQQKAILARCL 420

Query: 417 ATNPSVLLMDEPTRGVDVGAKSEIHHILRELASQGVGVVVISSELPEIIGLCDRALVIRD 476
             NP +L++DEPTRG+D+GAK EI+ ++ +L  QG+ V+VISSELPE++GL DR LV+ +
Sbjct: 421 LLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMHE 480

Query: 477 GRLAGEVQDNEMTEEALLRLA 497
           G+L   + ++ +T+E ++  A
Sbjct: 481 GKLKANLINHNLTQEQVMEAA 501



 Score = 78.6 bits (192), Expect = 5e-19
 Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 9/228 (3%)

Query: 274 VHGVSFTLRRGEILGIAGLMGAGRSELAETVCGL--RTATRGAVRLRGRTLAIRKYSDAL 331
           +  V   L  GEI+ + G  G+G+S L + +CG+    +  G +   G  +      D  
Sbjct: 20  IDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTE 79

Query: 332 REGIAYLSEDRKAAGVYLDLPIAQNIASMALRRVSSRFGLLQRAAERKLALDLGGKLKLK 391
           R+GIA + ++     +  +L + +NI    L    +  G++           L  ++ L 
Sbjct: 80  RKGIAIIHQE---LALVKELTVLENIF---LGNEITHNGIMDYDLMTLRCQKLLAQVSL- 132

Query: 392 SDGVDIDVASLSGGNQQKVAIAKLLATNPSVLLMDEPTRGVDVGAKSEIHHILRELASQG 451
           S   D  V  L  G QQ V IAK L     +L++DEPT  +     S +  I+R+L   G
Sbjct: 133 SISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETSILLDIIRDLQQHG 192

Query: 452 VGVVVISSELPEIIGLCDRALVIRDGRLAGEVQDNEMTEEALLRLASG 499
           +  + IS +L E+  + D   VIRDG+  G      M+E+ ++ +  G
Sbjct: 193 IACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDDIITMMVG 240