Pairwise Alignments

Query, 340 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 336 a.a., dipeptide ABC transporter, permease component (from data) from Pseudomonas simiae WCS417

 Score =  233 bits (593), Expect = 7e-66
 Identities = 124/317 (39%), Positives = 190/317 (59%), Gaps = 3/317 (0%)

Query: 24  LLLVTFLIGKAAPIDPVLQVVGDR-ASPEAYQEARQRMGLDQPIATQFVRYVADAAKGDL 82
           + L+TF + +  P DPV  ++G+R   PE + +A +R+GL++P+  Q++ YV   A+GDL
Sbjct: 19  ITLLTFALIRMIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYAQYLDYVGKLAQGDL 78

Query: 83  GRSTTTGRAVLEDLRQYFPATLELATLGILLGVVFGVPLGMLAAHQHNRWIDQLLRLVGL 142
           G S  T  +V  +    FPATLEL+   +L   + G+  G++AA +     D  +  + L
Sbjct: 79  GESLRTRTSVWTEFTALFPATLELSMAALLFAGILGLLAGVIAALKRGSLFDHGVMGISL 138

Query: 143 LGYSVPVFWLGLVGLLIFYARLGWVGGPGRLDDIYQYTVDSWSNLVLVDTLRAGNGEAFR 202
            GYS+P+FW GL+ ++ F   LGW    GR+D +Y   ++  +  +L+DTL A   +AF 
Sbjct: 139 AGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYD--IEPRTGFMLIDTLLADEPDAFW 196

Query: 203 NGLSHLVLPAALLGYFSLAYISRMTRAFFLEELGKEYVLTARVKGASELQVLVRHVLPNV 262
           + L HL+LPA +LG   LA I+RMTR+  LE L ++Y+ TA+ KG S  +V+  H L N 
Sbjct: 197 DALHHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTAKAKGLSPARVVFVHGLRNA 256

Query: 263 AAPLVTVIALSYAVLLEGAVLTETVFSWPGIGLYVTNALFSADVAAVLGGTLLVGLCFVV 322
             P++TV+ L    LL GAVLTET+FSWPGIG ++  A+ + D   V  G LL+    ++
Sbjct: 257 LIPVLTVVGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDYPVVQNGILLIACLVIL 316

Query: 323 LNTASDVLGYLMDPRAR 339
           +N   D+L    +PR R
Sbjct: 317 VNFVVDILYGFANPRIR 333