Pairwise Alignments

Query, 298 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

 Score =  241 bits (615), Expect = 1e-68
 Identities = 125/270 (46%), Positives = 173/270 (64%), Gaps = 6/270 (2%)

Query: 33  RSPAMVFGLVILAAMVLAALFAPWLAPFDPNAQNVQQRLLPPG------AAHWLGTDQLG 86
           ++   V GL+ +  +V  A+FAPW+AP +P+ Q     L PP           LGTD+LG
Sbjct: 29  KNKGAVAGLLFMLLIVFCAIFAPWVAPHNPSEQYRDFLLTPPAWLEGGQMQFLLGTDELG 88

Query: 87  RDLLSRVIYGTRPTLLIVSLVALLSAPLGLLLGMCAGYFGGWIDTLLMRVTDIFMAFPRL 146
           RDLLSR+I G+R +LLI     ++S   G+LLG+ AG+F   +   +MR+ DI +A P L
Sbjct: 89  RDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLGPTIMRLMDIMLALPSL 148

Query: 147 VLALALVAVLGPGIVNAVIAIAITAWPAYARIARTETRTVRGSDFIQAARVQGLRPARIL 206
           +LA+A+VA+LGPG++N VIAIAI + P+Y R+ R         D++ AAR+ G    R++
Sbjct: 149 LLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLM 208

Query: 207 FGHLLPICLPSTVVRVTLDMAGIILTAAGLGFLGLGAQPPMSEWGAMISTGRQYIFDQWW 266
           F  +LP C+   +V+ TL  +  IL AA LGFLGLG QPP  EWG M+++ R YI   WW
Sbjct: 209 FITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWW 268

Query: 267 VAAVPGVAILLGSLAFNLVGDGLRDVLDPK 296
           V ++PG+ ILL  LA NL+GDGLRD LDPK
Sbjct: 269 VVSLPGLTILLSVLAINLMGDGLRDALDPK 298