Pairwise Alignments

Query, 298 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  246 bits (627), Expect = 6e-70
 Identities = 128/270 (47%), Positives = 172/270 (63%), Gaps = 6/270 (2%)

Query: 33  RSPAMVFGLVILAAMVLAALFAPWLAPFDPNAQNVQQRLLPP---GAAHW---LGTDQLG 86
           R+   V GL  +  +V  ALFAPW+AP DP+ Q     L PP       W   LGTD+LG
Sbjct: 34  RNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELG 93

Query: 87  RDLLSRVIYGTRPTLLIVSLVALLSAPLGLLLGMCAGYFGGWIDTLLMRVTDIFMAFPRL 146
           RDLLSR+I G R +LLI     ++S   G+LLG+ AG+F   +   +MR+ D+ +A P L
Sbjct: 94  RDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSL 153

Query: 147 VLALALVAVLGPGIVNAVIAIAITAWPAYARIARTETRTVRGSDFIQAARVQGLRPARIL 206
           +LA+A+VA+LGPG++N VIAIAI + P+Y R+ R         D++ AAR+ G    R++
Sbjct: 154 LLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLM 213

Query: 207 FGHLLPICLPSTVVRVTLDMAGIILTAAGLGFLGLGAQPPMSEWGAMISTGRQYIFDQWW 266
           F  +LP C+   +V+ TL  +  IL AA LGFLGLG QPP  EWG M+++ R YI   WW
Sbjct: 214 FVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWW 273

Query: 267 VAAVPGVAILLGSLAFNLVGDGLRDVLDPK 296
           V ++PG+ ILL  LA NL+GDGLRD LDPK
Sbjct: 274 VVSLPGLTILLSVLAINLMGDGLRDALDPK 303