Pairwise Alignments

Query, 298 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  269 bits (687), Expect = 7e-77
 Identities = 130/265 (49%), Positives = 178/265 (67%)

Query: 34  SPAMVFGLVILAAMVLAALFAPWLAPFDPNAQNVQQRLLPPGAAHWLGTDQLGRDLLSRV 93
           SP  V G VI+  M+L  +F+PWLA  DPNA ++  RLLPP AAHW GTD++GRDL SRV
Sbjct: 30  SPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRV 89

Query: 94  IYGTRPTLLIVSLVALLSAPLGLLLGMCAGYFGGWIDTLLMRVTDIFMAFPRLVLALALV 153
           + G++ ++L   +V  ++  +G LLG  +G  GG  D ++MR+ DI ++ P LVL +AL 
Sbjct: 90  LVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALA 149

Query: 154 AVLGPGIVNAVIAIAITAWPAYARIARTETRTVRGSDFIQAARVQGLRPARILFGHLLPI 213
           A LGP + NA++AIAI   P Y R+AR +   VR   ++QAA+  G     ++  H+L  
Sbjct: 150 AALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRN 209

Query: 214 CLPSTVVRVTLDMAGIILTAAGLGFLGLGAQPPMSEWGAMISTGRQYIFDQWWVAAVPGV 273
            LP  +V+ +LD+   IL AA LGF+GLGAQ P +EWGAM++ GR Y+ DQWW  A PG 
Sbjct: 210 SLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGA 269

Query: 274 AILLGSLAFNLVGDGLRDVLDPKNG 298
           AILL ++ FNL GDG+RD+LDPK G
Sbjct: 270 AILLTAVGFNLFGDGIRDLLDPKAG 294