Pairwise Alignments

Query, 282 a.a., Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

 Score =  203 bits (517), Expect = 3e-57
 Identities = 121/270 (44%), Positives = 164/270 (60%), Gaps = 3/270 (1%)

Query: 1   MAELLIEDLTVTYPTASGPVDVVKSLSLRMGA-ERIGIVGESGSGKSMTARAILGLVRSP 59
           M+ L I +L V +  A+  V VV  L L++ A E + IVGESGSGKS+T  A++GL+ +P
Sbjct: 1   MSLLQINNLNVRFGDANA-VPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAP 59

Query: 60  GRATASRMAYDGADLLRQTPSGWRAIRGRRIGMVLQDPKFSLNPVLRVGRQIAEAGLLHG 119
           GR TA  + +DG D+L+ +    R + G+ I MV QDP  +LNP   VG QI E    H 
Sbjct: 60  GRITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHL 119

Query: 120 VFKPAQARDRVLEMLRTVGVDNPERVHDAYPHQLSGGIGQRVMIAAMMIAEPGLLIADEP 179
             K   AR R LE+L+ V +   E   DAYPHQLSGG+ QRV IA  +  EP LLIADEP
Sbjct: 120 GLKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEP 179

Query: 180 TSALDVMVRGQVLEMMDREIRKRGMGLLMISHDLKMVAHFCDRVLVMYRGQVVESCAAKD 239
           T+ALDV ++ Q++E++    ++R M L++I+HDL +VA    RV VMY GQ VE     +
Sbjct: 180 TTALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPE 239

Query: 240 LFR-SQHPYTRGLLNCMPTGQNPGQPLPTI 268
           LF    HPY+  LL  +P      + L T+
Sbjct: 240 LFDVPAHPYSEALLAAIPEHSIGAERLATL 269