Pairwise Alignments

Query, 282 a.a., Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 337 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain from Enterobacter asburiae PDN3

 Score =  198 bits (504), Expect = 1e-55
 Identities = 112/265 (42%), Positives = 163/265 (61%), Gaps = 3/265 (1%)

Query: 6   IEDLTVTYPTASGPVDVVKSLSLRMGA-ERIGIVGESGSGKSMTARAILGLVRSPGRATA 64
           ++DL VT+ T  G V  V  L+  + A E +GIVGESGSGKS TA A++GL+ S G    
Sbjct: 22  VKDLRVTFKTPDGDVTAVNDLNFNLRAGETLGIVGESGSGKSQTAFALMGLLASNGVIGG 81

Query: 65  SRMAYDGADLLRQTPSGWRAIRGRRIGMVLQDPKFSLNPVLRVGRQIAEAGLLHGVFKPA 124
           S   ++G ++L         +R  +I M+ QDP  SLNP +RVG Q+ E  +LH     A
Sbjct: 82  SAK-FNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGLGKA 140

Query: 125 QARDRVLEMLRTVGVDNPERVHDAYPHQLSGGIGQRVMIAAMMIAEPGLLIADEPTSALD 184
           +A +  ++ML  V +    +    +PH+ SGG+ QRVMIA  ++  P LLIADEPT+ALD
Sbjct: 141 EAFEESVKMLDAVKMPEARKRMRMFPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALD 200

Query: 185 VMVRGQVLEMMDREIRKRGMGLLMISHDLKMVAHFCDRVLVMYRGQVVESCAAKDLF-RS 243
           V V+ Q++ +++   R+    ++MI+HDL +VA  CD+VLVMY G+ +E   A+D+F + 
Sbjct: 201 VTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVFYQP 260

Query: 244 QHPYTRGLLNCMPTGQNPGQPLPTI 268
            HPY+ GLLN +P     G+ L TI
Sbjct: 261 AHPYSIGLLNAVPRLDAEGESLLTI 285