Pairwise Alignments

Query, 269 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  184 bits (467), Expect = 4e-51
 Identities = 118/261 (45%), Positives = 151/261 (57%), Gaps = 18/261 (6%)

Query: 12  ETVIRCQGLDVFYGHGAQRHHAVKQASFEVLRGESFGIVGGSGSGKSTILRVLAGLDGDW 71
           +  I   G   F+G   Q    V  AS  +  GE+  +VGGSGSGK+T+ R L GL    
Sbjct: 280 QVCIEHPGPTTFWGK-RQHTRVVHSASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPC 338

Query: 72  QGDVDVLGHRRAAGV----APGRAYRLKVQMIFQDPFGSLHPRHTIDRCLSEAMRFH-GF 126
            G +      R  GV    A  R +RL+ QMIFQDP+ SL+PR  I   L+E +R   G 
Sbjct: 339 AGSI------RFKGVDILKAANRTHRLQCQMIFQDPYSSLNPRMKIGEILAEPLRHEPGL 392

Query: 127 DRIE--QRVVSALDRVGLGKSFRFRFPHQLSGGQRQRVAIARALVLEPEVLLLDEPTSAL 184
           +  E  +RV   L  +GLG+ F  RFPHQLSGGQRQRVAI RALV  P++++ DEP SAL
Sbjct: 393 NAAERRERVTQTLKDIGLGEQFVERFPHQLSGGQRQRVAIGRALVRHPQLVIADEPISAL 452

Query: 185 DASIQAEVLNLLMEVRRDLGTTFLFVSHDLGVIAHMCDRVAVMRQGVVVETLAAARITAG 244
           D +IQ ++L L   ++   G   LF+SHDL  +  +  RVAVM QG VVE  A  +I   
Sbjct: 453 DMTIQKQILELFERLQAQYGFACLFISHDLAAVERIAHRVAVMHQGNVVEVGAREQI-FD 511

Query: 245 QVAHPYTRELLANCYAAQPLD 265
              HPYTR+LLA   AA PL+
Sbjct: 512 HPQHPYTRQLLA---AASPLE 529



 Score =  135 bits (339), Expect = 2e-36
 Identities = 89/234 (38%), Positives = 129/234 (55%), Gaps = 12/234 (5%)

Query: 33  AVKQASFEVLRGESFGIVGGSGSGKSTILRVLAGL----DGDWQGDVDVLGHRRAAGVAP 88
           AV   SF +  GE   +VG SGSGK+   R   GL         G +D  G   A+    
Sbjct: 24  AVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPMQVCGGRLDFQGRDLASVSTE 83

Query: 89  G-RAYR-LKVQMIFQDPFGSLHPRHTIDRCLSEAMRFHGF---DRIEQRVVSALDRVGLG 143
             RA R   + M+FQ+P  SL+P   I + +SEA++ H      +I +R ++ L R+G+ 
Sbjct: 84  ALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHTDLDPPQIRERCLTMLRRIGIK 143

Query: 144 KSFRF--RFPHQLSGGQRQRVAIARALVLEPEVLLLDEPTSALDASIQAEVLNLLMEVRR 201
            + R    +PHQ SGG RQR+ +A  ++L P +L+ DEPT+ALD   Q +V+ L++E+ R
Sbjct: 144 AAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPTTALDCLAQLDVIELMLELTR 203

Query: 202 DLGTTFLFVSHDLGVIAHMCDRVAVMRQGVVVETLAAARITAGQVAHPYTRELL 255
           + GT  LF+SHDL ++A    +V VMR G  VE  +   I     A  YTR+LL
Sbjct: 204 EQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDILLAPKAE-YTRQLL 256