Pairwise Alignments

Query, 558 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  181 bits (458), Expect = 9e-50
 Identities = 153/524 (29%), Positives = 239/524 (45%), Gaps = 48/524 (9%)

Query: 53  RYTYADCYARVCRSANALRALGVEPGDRVGILDWNSRRHFELYWSIPGLGAVMLQMNLRL 112
           RY++     +V   A AL ALGV  GDRVGI   N  +   L  +   +GA+++ +N   
Sbjct: 45  RYSWRQLAEQVEIYARALIALGVNTGDRVGIWSPNCAQWCILQLASAKVGAILVNINPAY 104

Query: 113 GPEDLGYVVDHSKVSY-VCVD-----------ESLLPLAESVAANS------PQIKGWIV 154
              +L YV+  S   + VC +           + L+P   S A         P+++G I 
Sbjct: 105 RVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELVPELASAAPGELASECLPELRGVIS 164

Query: 155 MTDKPLDQIKTTLKPLLHYEDLLAAADTKIDWPEIDETSAY-----SACYTTGTTGKPKG 209
           +   P         P   + +   A  T ++     + S       +  YT+GTTG PKG
Sbjct: 165 LAANP----PAGFLPWHAFAE--RAGQTSVEACTARQQSLQFDQPVNIQYTSGTTGAPKG 218

Query: 210 VYYSHRGIYLHSTAMATNLGMTLDDCVMLITPMFHGQCWGLPQA---ATLLADKIVLPGR 266
              SH  I  +   +  +LG+T  D +++  P++H  C+G+  A          ++ P  
Sbjct: 219 ATLSHYNILNNGFMVGESLGLTARDRMVIPVPLYH--CFGMVMANLGCITHGSTMIYPND 276

Query: 267 YVAEDTKPLVDAMIAEGVTIANGAPAIFQPMLQYIETMPVKPDFSRMRMLSGATEPPLSM 326
             A D +  + A+  E  TI  G P +F  ML +     +     R  +++GAT P   M
Sbjct: 277 --AFDAELTLRAVAEERATILYGVPTMFIAMLDHPSRAHMDLSTLRSGIMAGATCPIEVM 334

Query: 327 MIGFYDLTGAEVVHAYGATEATTLVTMNRLKSTLKKRLTEEEKWNLKRKQGLVLTGVDIR 386
                 +  AEV  AYG TE + +         L+ R+T           G     ++ +
Sbjct: 335 RRVIDQMHMAEVQIAYGMTETSPVSLQTGPDDDLELRVTTV---------GRTQPQLENK 385

Query: 387 ILDADDKDLPHDGKSAGEICLRGPWITARYHDMPDS-ADRFLEGGWWRSGDVGTVDENGY 445
           ++DAD   +P      GE+C RG  +   Y D P + AD     GW  SGD+  +DE GY
Sbjct: 386 LVDADGCIVPRG--EIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAVMDEQGY 443

Query: 446 LKVTDRIKDVIKSGGEWISSIDMENLLMGHPAVRDAAVVGIPHAKWQERPLALVVLRPGQ 505
           +++  R KD+I  GGE I   ++E     HPAV DA V+GIP +++ E  +A + L PG 
Sbjct: 444 VRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHPGH 503

Query: 506 QATQEQLQEHLTSAFAKWQLPDQVLFVEAIPKTSVGKLDKKRIR 549
            AT E+LQ    +  A +++P  + FV+  P T  GK+ K R+R
Sbjct: 504 SATVEELQGWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMR 547