Pairwise Alignments

Query, 558 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  233 bits (595), Expect = 1e-65
 Identities = 173/542 (31%), Positives = 263/542 (48%), Gaps = 33/542 (6%)

Query: 20  NERQLNTTTLIRHAARTHGDQEIVYRTPDGGWDRYTYADCYARVCRSANALRALGVEPGD 79
           N   L   + I   A  +G+   V      G  R  + + Y R  R A+AL   G+  GD
Sbjct: 14  NHVALTPLSFIERTAAVYGNYPAVIH----GAIRRNWQETYQRCRRLASALAGRGIGRGD 69

Query: 80  RVGILDWNSRRHFELYWSIPGLGAVMLQMNLRLGPEDLGYVVDHSKVSYVCVDESLLPLA 139
            V ++  N+    E ++ +P  GAV+  +N+RL  E + +++ H +   +  D     + 
Sbjct: 70  TVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHAVI 129

Query: 140 ESVAA--NSPQIKGWIVMTDKPLDQIKTTLKPLLHYEDLLAAADTKI--DWPEIDETSAY 195
           E   A    P +   +V  D P +  +      L YE LL   D +   +WP+ DE  A 
Sbjct: 130 EGALALLEHPPL---VVDVDDP-EYGEGRAVSQLDYEALLNEGDPEFAWEWPD-DEWQAI 184

Query: 196 SACYTTGTTGKPKGVYYSHRGIYLHSTAMATNLGMTLDDCVMLITPMFHGQCWGLPQAAT 255
           S  YT+GTTG PKGV Y HRG YL++        M      +   PMFH   W  P   T
Sbjct: 185 SLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCNGWCYPWTIT 244

Query: 256 LLADKIVLPGRYVAEDTKPLVDAMIAEGVTIANGAPAIFQPMLQYIETMPVKPDFSRMRM 315
            LA   V   R    D + ++  +    V+   GAP +   ++   E      +     M
Sbjct: 245 ALAGTHVFLRRV---DPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIEHPVQAM 301

Query: 316 LSGATEPPLSMMIGFYDLTGAEVVHAYGATEATTLVTMNRLKSTLKKRLTEEEKWNLKRK 375
           ++GA  P  + +IG  +  G +V H YG TE    VT+          L+ EE+  +K +
Sbjct: 302 VAGAAPP--AKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWDA-LSLEERARIKSR 358

Query: 376 QGLVLTGVDIRILDADDKDL---PHDGKSAGEICLRGPWITARYHDMPDSADRFLEGGWW 432
           QG+    +D  ++ AD + L   P DG + GEI +RG  +   Y   P++      GGW+
Sbjct: 359 QGVRYPTLD-GLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGGWF 417

Query: 433 RSGDVGTVDENGYLKVTDRIKDVIKSGGEWISSIDMENLLMGHPAVRDAAVVGIPHAKWQ 492
            +GD+     +GY+++ DR+KD+I SGGE IS+I++E+ L  H AV +AAVV  P  KW 
Sbjct: 418 HTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEKWG 477

Query: 493 ERPLALVVLRPGQQATQEQ-----LQEHLTSAFAKWQLPDQVLFVEAIPKTSVGKLDKKR 547
           E P A V L+PG++ T+E       +EHL    A +++P  V+F E +PKTS GK+ K  
Sbjct: 478 ETPCAFVALKPGREDTREADITSWCREHL----AGFKVPKTVVFGE-LPKTSTGKIQKYV 532

Query: 548 IR 549
           +R
Sbjct: 533 LR 534