Pairwise Alignments

Query, 558 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

 Score =  177 bits (450), Expect = 7e-49
 Identities = 146/526 (27%), Positives = 238/526 (45%), Gaps = 52/526 (9%)

Query: 53  RYTYADCYARVCRSANALRALGVEPGDRVGILDWNSRRHFELYWSIPGLGAVMLQMNLRL 112
           RYT+      V + A AL ALGV+PGDR+GI   N        ++   +GA+++ +N   
Sbjct: 45  RYTWRQLADAVDQHARALMALGVQPGDRLGIWAPNCAEWCITQFASAKVGAILVNINPAY 104

Query: 113 GPEDLGYVVDHSKVSYV-CVD-----------ESLLP-LAES-----VAANSPQIKGWIV 154
              +L Y +  S   +V C D           + LLP LA S     +    P+++G + 
Sbjct: 105 RSSELDYALGQSGCRWVICADAFKTSDYHAMLQGLLPGLASSQPGALICERFPELRGVVS 164

Query: 155 MTDKPLDQIKTTLKPLLHYEDLLAAADTKIDWPEIDETSAYSAC-------YTTGTTGKP 207
           +   P           L +  L A A+  +    +    A   C       YT+GTTG P
Sbjct: 165 LALSPPPGF-------LAWHALQARAEV-VSGEALAARQAQLRCDDPINIQYTSGTTGFP 216

Query: 208 KGVYYSHRGIYLHSTAMATNLGMTLDDCVMLITPMFHGQCWGLPQA---ATLLADKIVLP 264
           KG   SH  I  +   +  +LG+T  D +++  P++H  C+G+  A          ++ P
Sbjct: 217 KGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYH--CFGMVMANLGCMTHGSALIYP 274

Query: 265 GRYVAEDTKPLVDAMIAEGVTIANGAPAIFQPMLQYIETMPVKPDFSRMRMLSGATEPPL 324
               A D    + A+  E  T   G P +F   L + +         R  +++GAT P  
Sbjct: 275 SD--AFDPLATLRAVAQEKATALYGVPTMFIAELDHPQRGEFDLSSLRTGIMAGATCPIE 332

Query: 325 SMMIGFYDLTGAEVVHAYGATEATTLVTMNRLKSTLKKRLTEEEKWNLKRKQGLVLTGVD 384
            M     ++  AEV  AYG TE + +         L++R+T           G     ++
Sbjct: 333 VMRRVIGEMHMAEVQIAYGMTETSPVSLQTGAADDLERRVTSV---------GRTQPRLE 383

Query: 385 IRILDADDKDLPHDGKSAGEICLRGPWITARYHDMPDSADRFLEG-GWWRSGDVGTVDEN 443
            +++DA+   +P      GE+C RG  +   Y + P +    ++  GW  +GD+  +DE 
Sbjct: 384 SKVVDAEGNTVPRG--EIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGDLAVMDEQ 441

Query: 444 GYLKVTDRIKDVIKSGGEWISSIDMENLLMGHPAVRDAAVVGIPHAKWQERPLALVVLRP 503
           GY+++  R KD+I  GGE I   ++E     HPAV D  V+G+P +K+ E  +A V L P
Sbjct: 442 GYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHP 501

Query: 504 GQQATQEQLQEHLTSAFAKWQLPDQVLFVEAIPKTSVGKLDKKRIR 549
           G   ++ +L+E   +  A +++P    FV+  P T  GK+ K R+R
Sbjct: 502 GHAVSEVELREWARARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMR 547