Pairwise Alignments

Query, 558 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  211 bits (537), Expect = 6e-59
 Identities = 164/535 (30%), Positives = 260/535 (48%), Gaps = 22/535 (4%)

Query: 20  NERQLNTTTLIRHAARTHGDQEIVYRTPDGGWDRYTYADCYARVCRSANALRALGVEPGD 79
           N   L+  + ++ AA+ +  ++ V      G  RY+Y   + R    A+AL  +GV+PG+
Sbjct: 16  NHVPLSPLSFLKRAAQVYPQRDAVIY----GARRYSYRQLHERSRALASALERVGVQPGE 71

Query: 80  RVGILDWNSRRHFELYWSIPGLGAVMLQMNLRLGPEDLGYVVDHSKVSYVCVDESLLPLA 139
           RV IL  N     E ++ +PG GAV++ +N+RL    + +++ H     +  D     +A
Sbjct: 72  RVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLICDREFGAVA 131

Query: 140 ESVAANSPQIKGWIVMTDKPLDQIKTTLKPLLHYEDLLAAADTK--IDWPEIDETSAYSA 197
               A        + + D   +  +  L   L YE  LA  D    +  P+ +E  + + 
Sbjct: 132 NQALAMLDAPPLLVGIDDDQAE--RADLAHDLDYEAFLAQGDPARPLSAPQ-NEWQSIAI 188

Query: 198 CYTTGTTGKPKGVYYSHRGIYLHSTAMATNLGMTLDDCVMLITPMFHGQCWGLPQAATLL 257
            YT+GTTG PKGV   HRG YL++ A A    +      +   PMFH   W    A TL 
Sbjct: 189 NYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHCNGWSHTWAVTLS 248

Query: 258 ADKIVLPGRYVAEDTKPLVDAMIAE-GVTIANGAPAIFQPMLQYIETMPVKPDFSRMRML 316
               V   R V  D    ++A IAE  VT  + AP +   ML + E     P    + ++
Sbjct: 249 GGTHVCL-RKVQPDA---INAAIAEHAVTHLSAAPVVMS-MLIHAEHASAPP--VPVSVI 301

Query: 317 SGATEPPLSMMIGFYDLTGAEVVHAYGATEATTLVTMNRLKSTLKKRLTEEEKWNLKRKQ 376
           +G   PP S +I   +  G  + HAYG TE+    T+   +  + + L  E +     +Q
Sbjct: 302 TGGAAPP-SAVIAAMEARGFNITHAYGMTESYGPSTLCLWQPGVDE-LPLEARAQFMSRQ 359

Query: 377 GLVLTGVD-IRILDADD-KDLPHDGKSAGEICLRGPWITARYHDMPDSADRFLEGGWWRS 434
           G+    ++   +LD D  + +P DG + GE+ +RG  +   Y   P++    L  GW  +
Sbjct: 360 GVAHPLLEEATVLDTDTGRPVPADGLTLGELVVRGNTVMKGYLHNPEATRAALANGWLHT 419

Query: 435 GDVGTVDENGYLKVTDRIKDVIKSGGEWISSIDMENLLMGHPAVRDAAVVGIPHAKWQER 494
           GD+  +  +GY+++ DR KD+I SGGE ISS+++E +L  HP V +AAVV  P ++W E 
Sbjct: 420 GDLAVLHLDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWGET 479

Query: 495 PLALVVLRPGQQATQEQLQEHLTSAFAKWQLPDQVLFVEAIPKTSVGKLDKKRIR 549
           P A V LR    A+ + L        A ++ P  V  V+ +PKT+ GK+ K  +R
Sbjct: 480 PHAFVTLRADALASGDDLVRWCRERLAHFKAPRHVSLVD-LPKTATGKIQKFVLR 533