Pairwise Alignments

Query, 349 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

Subject, 393 a.a., carnitine dehydratase from Pseudomonas simiae WCS417

 Score =  167 bits (424), Expect = 3e-46
 Identities = 117/347 (33%), Positives = 173/347 (49%), Gaps = 35/347 (10%)

Query: 8   PLHGVRVVEFEGIGPGPLAARMLVDMGAEVIALARAEQAAGAQRLG------GAVENPLH 61
           PL  ++V++F  + PGP A+ ML DMGAEV+ +    +    + L        A    L+
Sbjct: 4   PLASLKVLDFSTLLPGPFASLMLADMGAEVLRIESPTRMDLLRVLPPHDQGTSASHAYLN 63

Query: 62  RGKKVEVIDLKSPGGKARALE----LIAQADALIEGFRPRVMERLGFGPADCAALNPRLV 117
           R K+   +DLK    +A ALE    L+   D L+E FRP VM+RLG G     A+NPRL+
Sbjct: 64  RNKRSLALDLK----QAEALEIVRVLVNDYDILLEQFRPGVMDRLGLGYEALKAINPRLI 119

Query: 118 YGRMTGWGQDGPLAQAAGHDLNYVALTGLLSLSAHRGQAPIVPPSVLGD-GAGALGMAFG 176
           Y  +TG+GQ GP    AGHD+NY+AL G+ S +  +   P+     L D G G+L    G
Sbjct: 120 YVAITGYGQTGPYKDRAGHDINYLALAGVASYTGRQDAGPLPLGVQLADVGGGSLHAVVG 179

Query: 177 VACALVDARATGHGRVVDAAIIDIVAMLGTLVHWIRANGQIDGAQPS----PFHDSPFYD 232
           +  A++  + +G G+ +D ++ D    L  +     A     G +P       +   FYD
Sbjct: 180 LLAAVIARQQSGVGQYLDVSMTDCSFSLNAMA---GAGYLACGVEPEWESHVLNGGSFYD 236

Query: 233 VYACADGGFISLAAVEPAFHALLLSKLGLADV-------NPAEQYDAATWPALKERIAAF 285
            Y   DG ++S+ ++EPAF   L + LG  ++        P +Q       ALK+ +   
Sbjct: 237 YYRSRDGRWMSVGSLEPAFMQQLCTALGRPELAAQGLSPKPEQQ------KALKQALQVE 290

Query: 286 IRSQPRAHWCALLEGSDACFAPVLSLAEAVRHPHNAARGIYQITPSG 332
              +     CAL   +DAC  PVL+L+EAV HP   AR +    P G
Sbjct: 291 FEKRSFDELCALFAATDACVEPVLTLSEAVAHPQLKARALVSQVPRG 337