Pairwise Alignments

Query, 381 a.a., Butyryl-CoA dehydrogenase (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  209 bits (533), Expect = 8e-59
 Identities = 124/375 (33%), Positives = 206/375 (54%), Gaps = 6/375 (1%)

Query: 11  MDHEIDAFREQVRRYVAAEFTPRLDEWRRQGYIPREVWRPFGGMSFLLPEMPETYGGAGA 70
           ++ E     + VR +      P  ++W +    P+E       +      +PE +GG+  
Sbjct: 3   VNDEQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDT 62

Query: 71  SLAYQLVVQDELAKAEMPVN--IAVH-TIASHYILDFGTEAQKQRWLPKVTNGEMLAAIA 127
                 +  +E+A  +   +  ++VH ++    IL FG E QK+++L  +  G ML A A
Sbjct: 63  GYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFA 122

Query: 128 MTEPGCGSDLKAISTRARRDGDYYVIDGAKTFITNGFTGNLLIVAARTS-GAGSKGVSLF 186
           +TEP  GSD  ++ TRAR +GD+YV++G+K FIT+G    ++IV A T   AG +G+S F
Sbjct: 123 LTEPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAF 182

Query: 187 VLETENLPGFRVGRLLEKIGMQASDTAELFFDSVRVPADQLLGSVEGQGFGQLMGALPYE 246
           ++ T++ PG++V R+ +K+G  ASDT ++ FD+V+VP    LG+ EG+G+   +  L   
Sbjct: 183 IVPTDS-PGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGA-EGEGYKIALANLEGG 240

Query: 247 RMVIAVPAAAVIDRALELTIEYTKQRKIFGAPLFDMQTTRQKLAEMATIAHVVRSFVNDC 306
           R+ IA  A  +   A E+  +Y  +R+ FG PL + Q    +LA+MAT   V R  V   
Sbjct: 241 RIGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHA 300

Query: 307 TQRLLDGTLDNEAAYMAKWWCTEQQCRVVDECLQLFGGYGYMAEYPIARMYAASRVQKIY 366
                 G      A MAK + +E   +V  + LQ  GGYGY++++P+ R+Y   RV +IY
Sbjct: 301 AALRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIY 360

Query: 367 GGANEVLKDLVSRKL 381
            G +++ + +++R L
Sbjct: 361 EGTSDIQRMVIARNL 375