Pairwise Alignments

Query, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 76/305 (24%), Positives = 125/305 (40%), Gaps = 10/305 (3%)

Query: 37  RAGISESLLELKDSRVTVEQFNALFIAVKDSLNDECLGYLHERPMRPGSFALMVRSAFTA 96
           +AG+    ++  ++R  +     L+     +  D  +G    R +   +F  +  +   +
Sbjct: 31  QAGLDPQKMDDPNARYPLSATTRLWELAVQASGDPAIGLRVSRFVSATTFHALGYALVAS 90

Query: 97  HSLSCALRRLSESFALLQDDVTLVPVTEGALGGFAL-EMRGGPGAHAEFLHAHLLRVFWR 155
            SL     R+     ++ D ++L    +G    F L ++ G P    E + A    ++ R
Sbjct: 91  GSLREVFERIVRYHQVVSDALSLELSGDGERYRFRLLQLPGSPAPAFEAIDA-FAAIYVR 149

Query: 156 LLLWLHGGRLVPQRFDFNFALPLHAMSYGRIFSGTLCFGQPRTAAWFDADAFKQPVRRDR 215
                 G    P         P+    +  +F   + F        F A  F   +    
Sbjct: 150 TCRNRLGREYAPLAVYLRRPEPVDPKPWHTVFRAPVFFDAEEDRLEFAAADFDSHLDDAN 209

Query: 216 DAL----QSFLRATPGNVVGPYLNERSASARVRMVLQRASPEWPDLVVTAQRLHLSVSAL 271
             L    ++ L+ T   +  P   ER   A +   L    P    +   AQ LHLS+ +L
Sbjct: 210 PELAEHNETVLKRTLAQLQ-PLTWERKVRAAIEAQLPDGEPSAERI---AQALHLSLRSL 265

Query: 272 QRHLASEGTSFQALKDQLRRDMAIVRLTSSEASLVAIAADLGFTDSTAFQRAFKVWTGSA 331
           QRHLA EG  F AL  + R ++A++ L     SL  I+  LGF D+++F RAFK WTG  
Sbjct: 266 QRHLADEGCRFDALLSECRENLALLHLRDPHCSLAEISHLLGFADTSSFNRAFKRWTGMT 325

Query: 332 PGAYR 336
           PG +R
Sbjct: 326 PGQFR 330