Pairwise Alignments

Query, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  153 bits (387), Expect = 5e-42
 Identities = 106/316 (33%), Positives = 156/316 (49%), Gaps = 13/316 (4%)

Query: 33  GVLGRAGISESLLELKDSRVTVEQFNALFIAVKDSLNDECLGYLHERPMRPGSFALMVRS 92
           G+L RAGI+   L L ++RV+ E +  L+  +    NDE    +  R +  GS A M R+
Sbjct: 28  GLLARAGIAVEQLHLPEARVSAESYARLWRLLARRCNDEFFA-MDTRGLCSGSLAFMCRA 86

Query: 93  AFTAHSLSCALRRLSESFALLQDDVTLVPVTEGALGGFAL-EMRGGPGAHAEFLHAHLLR 151
           +    +L   L       +L+  D+    V +  L    + E R  P        A    
Sbjct: 87  SMGQPTLGAGLETSLAFLSLMLQDMQPSLVRQQGLAEIVINEPRDEPR------RAFTYF 140

Query: 152 VFWRLL----LWLHGGRLVPQRFDFNFALPLHAMSYGRIFSGTLCFGQPRTAAWFDADAF 207
            FW ++     WL G R+     D   A P     Y  +FS  L F +PRT     +   
Sbjct: 141 TFWMIVHGVTCWLAGRRIPILSIDLRCAEPPFCDDYRVMFSENLHFERPRTRMIIASQYL 200

Query: 208 KQPVRRDRDALQSFLRATPGNVVGPYLNERSASARVRMVLQRASPE-WPDLVVTAQRLHL 266
             P+RR  + LQ FL   PGN++  Y +  S   R+R  L R +PE WPD    A++L L
Sbjct: 201 DLPLRRSEEELQRFLAEAPGNILVKYRDPASLGRRIRTDLLRLAPEQWPDADRLARQLCL 260

Query: 267 SVSALQRHLASEGTSFQALKDQLRRDMAIVRLTSSEASLVAIAADLGFTDSTAFQRAFKV 326
           S S L+R LA EG ++Q LKD +RR++AI  L+  + ++  +A  LGF DS++F +AF+ 
Sbjct: 261 SPSTLRRRLAEEGQNYQGLKDSVRRELAIAWLSQEDVAMGELAERLGFADSSSFYKAFRK 320

Query: 327 WTGSAPGAYRARSRSR 342
           W G  PG YRA  ++R
Sbjct: 321 WFGCNPGHYRALIQAR 336