Pairwise Alignments

Query, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 341 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  158 bits (399), Expect = 2e-43
 Identities = 107/337 (31%), Positives = 170/337 (50%), Gaps = 9/337 (2%)

Query: 7   TAPIFAVHGLLDGARGKGLATQEWLKGVLGRAGISESLLELKDSRVTVEQFNALFIAVKD 66
           T  +  VH  L  A  +GL T+     +L +A I+  +L    +R+ V  +  L+ A+ D
Sbjct: 12  TISVSLVHEALMVAYSRGLDTRL----ILQKAEIAPEILHSAKARIPVSAYARLWTALAD 67

Query: 67  SLNDECLGYLHERPMRPGSFALMVRSAFTAHSLSCALRRLSESFALLQDDVTLVPVTEGA 126
            +NDE  G +   PMR GS+ L+ +    A +L  A++ + +    + DD+ +    E  
Sbjct: 68  HMNDEFFG-MDSHPMRRGSYQLLSKMLLQAETLEKAVQDMLKFLNFILDDLQVELQLEQD 126

Query: 127 LGGFALEMRGGPGAHAEFLHAHLLRVFWRLLLWLHGGRLVPQRFDFNFALPLHAMSYGRI 186
                L  +G       F +A  L +   L+ WL G R++  + +     PL    Y   
Sbjct: 127 KAYLVLHDQGP--VKRMFSYATYLMLVHGLICWLSGQRVILDKIELRCMQPLDDQDYRVR 184

Query: 187 FSGTLCFGQPRTAAWFDADAFKQPVRRDRDALQSFLRATPGNVVGPYLNERSASARVRMV 246
           F   + +G  +    F     +  +++D++A   FL+ TP N++  Y N  S S  +R  
Sbjct: 185 FCEKIYYGASQNRIEFSRHYLEIKIKKDKNAWYDFLKHTPQNLLVRYKNPDSLSFSIRKY 244

Query: 247 LQRASP-EWPDLVVTAQRLHLSVSALQRHLASEGTSFQALKDQLRRDMAIVRLTSSEASL 305
           L    P EWP+L   A R +LS + + R L  EG S+Q LK+ +RRD+AI  LT ++ SL
Sbjct: 245 LSELVPAEWPELTDIAARFNLSETTMHRRLKYEGVSYQQLKNDIRRDIAIEYLTHTDLSL 304

Query: 306 VAIAADLGFTDSTAFQRAFKVWTGSAPGAYRARSRSR 342
             I+  L F D++AF RAFK WTG +PG YR ++RS+
Sbjct: 305 QDISEQLDFHDASAFHRAFKKWTGVSPGTYR-QNRSK 340