Pairwise Alignments

Query, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens GW456-L13

 Score =  441 bits (1134), Expect = e-128
 Identities = 264/595 (44%), Positives = 345/595 (57%), Gaps = 21/595 (3%)

Query: 4   YIAPLREMLFAMKEVGGLDAICAQ-PDHEETTP-DLVEAILQEAANYAAGVLDPLNRPGD 61
           Y APLR+M F + EV  +  + A+ P   ET   + VEAIL+EA    +  + PL+R  D
Sbjct: 4   YKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSRAAD 63

Query: 62  VQGARWHDGRVTPADGFREAWASFCENGWNGMPAATEWGGQGLPTLVSTAVLEMWKSSNL 121
            +G  W DG VT   GF +A+ ++ E GW G+     +GG G+P  VS  V EM  S++L
Sbjct: 64  EEGCHWADGAVTTPAGFPQAYQTYAEGGWVGVGGDPSYGGMGMPKAVSAQVEEMVNSASL 123

Query: 122 AFSLCQMLTLGAVEAIAHHGSDALQRRFLAPMVEGRWTGTMNLTEPQAGSDLAALRSRAV 181
           +F L  MLT GA  +I  H S+ L+  +L  M  G W G+M LTEP AG+DL  +R++A 
Sbjct: 124 SFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVWAGSMCLTEPHAGTDLGIIRTKAE 183

Query: 182 HEGD-HYHVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVNDDGT 240
            + D  Y VSG KIFIT GEHD+ ENI+HLVLA+LPDAP G KGISLFL PK++VN DG+
Sbjct: 184 PQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADGS 243

Query: 241 LGERNDLACTSIEHKMGIHGSPTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHARLNV 300
           LG RN   C SIEHKMGI  S T  M+F +   A+GYLVGEP++GLA MFTMMN+ RL V
Sbjct: 244 LGARNPANCGSIEHKMGIQASATCVMNFDE---AVGYLVGEPNKGLAAMFTMMNYERLGV 300

Query: 301 GLEGVGISERAYQRARAYALERVQGKPLISG------STAIAGHPDVRRMLMDMKARTEA 354
           G++G+   ER+YQ A  YA +R+Q +           +  I  HPDVRRML+ MKA  E 
Sbjct: 301 GIQGLATGERSYQNAVEYARDRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEG 360

Query: 355 MRALAYFCAGQMDRAAGHADAQERAQAQALVGLLIPVVKGWCTDSAQGITSDGVQVHGGM 414
            RA + + A Q+D A    DA  R +A+ LV LL PV K + TD     T  G Q+ GG 
Sbjct: 361 GRAFSTYVAMQLDTAKFSEDAATRKRAEDLVALLTPVAKAFLTDLGLETTVHGQQIFGGH 420

Query: 415 GYVEETGASQHMRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRIDGDARRLV 474
           GY+ E G  Q +RD RIT IYEGT GIQA DL+GRK+   GG    A       + R   
Sbjct: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGG----AFYNLFADEIRHFT 476

Query: 475 ESPDAVLAQIGRALAAAAQALDEAVDWLLAH-DGQPAQCAAGAVPFLRLAGTVIGGWLSA 533
            +  A LA+  + L  A  +LDE   WLL      P +  A +V +L++ G V   ++ A
Sbjct: 477 ATASADLAEFTKPLNDAVTSLDELTAWLLDRAKSNPNEIGAASVEYLQVFGYVAYAYMWA 536

Query: 534 RMAEAATAQLAAGAGDAGFLGTKRATASHYAAHVLVQAPMLRDIVTGGAASTLAL 588
            MA+AA  + A       F  +K  TA  Y A +L +   L   V  G+ S   L
Sbjct: 537 LMAKAAFGKEA----QDDFYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLL 587