Pairwise Alignments

Query, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 600 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  356 bits (913), Expect = e-102
 Identities = 223/563 (39%), Positives = 301/563 (53%), Gaps = 9/563 (1%)

Query: 9   REMLFAMKEVGGLDAICAQPDHEETTPDLVEAILQEAANYAAGVLDPLNRPGDVQGARWH 68
           R + F + EV   +A+  +P   E + +  +A L  A   A     P NR  D    R+ 
Sbjct: 9   RNLAFELYEVLDAEALTLRPRFAEHSRETFDAALTTARTIAEKYFAPHNRKADENEPRYV 68

Query: 69  DGRVTPADGFREAWASFCENGWNGMPAATEWGGQGLPTLVSTAVLEMWKSSNLAFSLCQM 128
           DGR       + A  +F E G+       E GG  LP+LVS A +  ++++N   +    
Sbjct: 69  DGRAELIPEVKPAVDAFLEAGFLNANRDFEVGGMQLPSLVSQACIAHFQAANAGTTAYPF 128

Query: 129 LTLGAVEAIAHHGSDALQRRFLAPMVEGRWTGTMNLTEPQAGSDLAALRSRAVHEGD-HY 187
           LT+GA   I   GSD  +R FL PM++GR+ GTM LTEP AGS LA +R+RA   GD  Y
Sbjct: 129 LTMGAANLIESFGSDEQKRLFLQPMIDGRYFGTMALTEPHAGSSLADIRTRAEPAGDGSY 188

Query: 188 HVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVNDDGTLGERNDL 247
            + GNKIFI+ G+H+++ENIVH+VLA+LPDAPPGVKGISLF+ PKY VN +G+ G RND+
Sbjct: 189 RLKGNKIFISGGDHELSENIVHMVLAKLPDAPPGVKGISLFIVPKYHVNPNGSRGPRNDV 248

Query: 248 ACTSIEHKMGIHGSPTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHARLNVGLEGVGI 307
               + HKMG  G+ + +++FGD+G  +GYLVG+PHQGLACMF MMN AR+ VG+  V +
Sbjct: 249 LLAGLFHKMGWRGTTSTALNFGDNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVML 308

Query: 308 SERAYQRARAYALERVQG-----KPLISGSTAIAGHPDVRRMLMDMKARTEAMRALAYFC 362
               Y  +  YA +R QG     K   S +  I  H DV+RML+  KA  E    L  + 
Sbjct: 309 GYAGYLYSLEYARQRPQGRLPDNKDPHSPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYA 368

Query: 363 AGQMDRAAGHADAQERAQAQALVGLLIPVVKGWCTDSAQGITSDGVQVHGGMGYVEETGA 422
           A   D      D   R  AQ L+ LL P+VK W +          +Q+ GG GY  E   
Sbjct: 369 ARLFDDTHTAPDENARKPAQDLLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTREYPV 428

Query: 423 SQHMRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRIDGDARRLVESPDA-VL 481
            Q+ RD R+  I+EGT GIQ+ DL+GRKLA+  G  LK L+  I     R    P+   L
Sbjct: 429 EQYYRDNRLNPIHEGTEGIQSLDLLGRKLAQHNGAGLKQLIRLIAATCERASHHPNLDPL 488

Query: 482 AQIGRALAAAAQALDEAVDWLLAHDGQPAQCAAGAVPFLRLAGTVIGGWLSARMA-EAAT 540
            Q    LA   Q +  A+   LA  G+ A   A +  +L+  G  + GW     A  A  
Sbjct: 489 RQPLEQLANRLQGVTLALLGDLA-QGKVAGALANSALYLKAFGHCVIGWRWLEQAVHAEL 547

Query: 541 AQLAAGAGDAGFLGTKRATASHY 563
             L   A D  F   K   A ++
Sbjct: 548 GMLKGTAADRDFYLGKLQAARYF 570