Pairwise Alignments

Query, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 589 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  442 bits (1136), Expect = e-128
 Identities = 265/602 (44%), Positives = 351/602 (58%), Gaps = 24/602 (3%)

Query: 1   VSVYIAPLREMLFAMKEVGGLDAICAQPDH--EETTPDLVEAILQEAANYAAGVLDPLNR 58
           ++ Y APLR+M F + +V     + A+     E    D  +AIL+EA+     ++ PL+R
Sbjct: 1   MTTYSAPLRDMRFVLHDVFNASGLWARLPALAERIDADTADAILEEASKVTGQLIAPLSR 60

Query: 59  PGDVQGARWHDGRVTPADGFREAWASFCENGWNGMPAATEWGGQGLPTLVSTAVLEMWKS 118
            GD QG  +  G+VT  +GFREAW ++ E GW G+    E+GG G+P ++     EM  +
Sbjct: 61  NGDEQGVCFDAGQVTTPEGFREAWNTYREGGWVGLGGNPEYGGMGMPKMLGVLFEEMLYA 120

Query: 119 SNLAFSLCQMLTLGAVEAIAHHGSDALQRRFLAPMVEGRWTGTMNLTEPQAGSDLAALRS 178
           ++ +FSL   L+ G+  AI  H S+AL+  +L P+ EGRW GTM LTEP AG+DL  +R+
Sbjct: 121 ADCSFSLYSALSAGSCLAIDAHASEALKATYLPPLYEGRWAGTMCLTEPHAGTDLGLIRT 180

Query: 179 RAVHEGD-HYHVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVND 237
           RA  + D    +SG+KIFIT GE D+ ENIVHLVLA++PDAP G KGISLFL PK+LV  
Sbjct: 181 RAEPQADGSVRISGSKIFITGGEQDLTENIVHLVLAKMPDAPAGAKGISLFLVPKFLVEA 240

Query: 238 DGTLGERNDLACTSIEHKMGIHGSPTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHAR 297
           DG LG RN + C SIEHKMGI  S T  M+F    GAIGYLVGEP++GL  MFTMMN+ R
Sbjct: 241 DGRLGARNAVHCGSIEHKMGIKASATCVMNF---DGAIGYLVGEPNKGLTAMFTMMNYER 297

Query: 298 LNVGLEGVGISERAYQRARAYALERVQGKPLI------SGSTAIAGHPDVRRMLMDMKAR 351
           L++G++G+G +E +YQ A  YA ER+Q +           +  I  H DVRRML+ M+  
Sbjct: 298 LSIGIQGIGCAEASYQSAARYANERLQSRAATGPQAHDKAADPIIHHGDVRRMLLTMRTL 357

Query: 352 TEAMRALAYFCAGQMDRAAGHADAQERAQAQALVGLLIPVVKGWCTDSAQGITSDGVQVH 411
           TEA RA A +   Q+D A    DA ER  AQ LV LL PV K + TD+       G QV+
Sbjct: 358 TEAGRAFAVYVGQQLDVARYAEDAGEREHAQRLVALLTPVAKAFFTDNGLESCVLGQQVY 417

Query: 412 GGMGYVEETGASQHMRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRIDGDAR 471
           GG GY+ E G  Q +RD RI  IYEGT GIQA DL+GRK+  +GG+ L +    +     
Sbjct: 418 GGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADGGQALASFASEV----- 472

Query: 472 RLVESPDAVLAQIGRALAAAAQALDEAVDWLLAHDGQPAQ-CAAGAVPFLRLAGTVIGGW 530
               S DA L +   AL A+   L+    WL A  G+ A   +A AV +L+L G     +
Sbjct: 473 -RAFSVDAPLHR--EALQASLARLEATSSWLRAQAGEDANLVSAVAVEYLQLFGLTAYAY 529

Query: 531 LSARMAEAATAQLAAGAGDAGFLGTKRATASHYAAHVLVQAPMLRDIVTGGAASTLALAD 590
           + ARMA  A   LA    D  F G K A A+ Y   VL +   L   +  G+ S   L  
Sbjct: 530 MWARMAAVA---LAKRDEDDAFHGAKLACAAFYFQRVLPRGLGLEASIRAGSGSLYGLEA 586

Query: 591 DQ 592
            Q
Sbjct: 587 TQ 588