Pairwise Alignments

Query, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  422 bits (1086), Expect = e-122
 Identities = 246/596 (41%), Positives = 343/596 (57%), Gaps = 12/596 (2%)

Query: 4   YIAPLREMLFAMKEVGGLDA-ICAQPDHEETTPDLVEAILQEAANYAAGVLDPLNRPGDV 62
           Y APLR++ F   E+ G +A   + P  ++ TPD+V+AIL+E A +   VL PLNR GD 
Sbjct: 4   YKAPLRDIRFVRDELLGYEAHYQSLPGCQDATPDMVDAILEEGAKFCEQVLSPLNRVGDQ 63

Query: 63  QGARWHDGRVTPADGFREAWASFCENGWNGMPAATEWGGQGLPTLVSTAVLEMWKSSNLA 122
           +G  W +  V    GF+EA+  F E GW  +    E GGQGLP  +  A+ EM   SN +
Sbjct: 64  EGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAHDVEHGGQGLPESLGLALSEMVGGSNWS 123

Query: 123 FSLCQMLTLGAVEAIAHHGSDALQRRFLAPMVEGRWTGTMNLTEPQAGSDLAALRSRAVH 182
           + +   L+ GA+  I+ HG+   Q  +L  +V G WTGTM LTEP  G+DL  LR++A  
Sbjct: 124 WGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTKAEP 183

Query: 183 EGD-HYHVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVNDDGTL 241
           + D  Y VSG KIFI+ GEHDMA+NIVH+VLARLPDAP G KGISLF+ PK+L N +G +
Sbjct: 184 QADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGGV 243

Query: 242 GERNDLACTSIEHKMGIHGSPTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHARLNVG 301
           GERN ++C SIEHKMGIHG+ T  M+F     A GYL+G  ++GL CMFT MN ARL   
Sbjct: 244 GERNGVSCGSIEHKMGIHGNATCVMNF---DAATGYLIGPANKGLNCMFTFMNTARLGTA 300

Query: 302 LEGVGISERAYQRARAYALERVQGKPLI------SGSTAIAGHPDVRRMLMDMKARTEAM 355
           L+G+  +E A+Q    YA ER+Q + L         +  I  HPDVRRML+ MKA  E  
Sbjct: 301 LQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGN 360

Query: 356 RALAYFCAGQMDRAAGHADAQERAQAQALVGLLIPVVKGWCTDSAQGITSDGVQVHGGMG 415
           RA+ YF A Q+D      D +ER +A AL+  L P+ K + T+      + GVQ++GG G
Sbjct: 361 RAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHG 420

Query: 416 YVEETGASQHMRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRIDGDARRLVE 475
           ++ E G  Q++RD+RI+ +YEGTTGIQA DL+GRK+    G  LK    +I     +  E
Sbjct: 421 FIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFT-KIVHKFCQAQE 479

Query: 476 SPDAVLAQIGRALAAAAQALDEAVDWLLAHDGQPAQCAAGAVPFLRLAGTVIGGWLSARM 535
             +AV   +    A   +  +  +   +A      +  A +V +L  +G     +  A +
Sbjct: 480 GNEAVKEFVEPLAAINKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADI 539

Query: 536 AEAATAQLAAGAGDAGFLGTKRATASHYAAHVLVQAPMLRDIVTGGAASTLALADD 591
           A  A  +LAAG  +  F   K  TA  Y   +L +       +  GA + +A+ ++
Sbjct: 540 ARLAAEKLAAGTSEEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMAMDEE 595