Pairwise Alignments

Query, 345 a.a., Conjugative transfer protein TrbB from Variovorax sp. SCN45

Subject, 461 a.a., conserved protein with nucleoside triphosphate hydrolase domain (NCBI) from Escherichia coli BW25113

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 136 MTAAQAGLLVRAVRERQN-ILIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTVELQCA 194
           M   Q      A+++ Q  +L+ G T +GKT    + L ++      +  +ED VE+  A
Sbjct: 199 MQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIA 258

Query: 195 ARDHVPLRTRQGVVSMTELVRSSMRLRPDRVIVGEVRGAEALDL-IKVWGTGHPGGIATI 253
             +   +  R G ++   ++R+ +R  PD +++GE+R  E  ++ IK   TGH   ++T+
Sbjct: 259 GLNQTQIHPRAG-LTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHL-VLSTL 316

Query: 254 HAGSALGALLRLEQLILEVAENPPRALIAEAVNVVI 289
           H  S    L+RL+Q+         R +++ A+ +VI
Sbjct: 317 HTNSTCETLVRLQQM------GVARWMLSSALTLVI 346