Pairwise Alignments

Query, 320 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Variovorax sp. SCN45

Subject, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  109 bits (273), Expect = 8e-29
 Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 16/265 (6%)

Query: 51  VRTAQGFAVPVARTLEAGAADWLIVPALGCKMPETLEPALQRADVRDACSALRERTSKGA 110
           V T+QGF+V        G    ++   L  ++PE            +    ++  +++  
Sbjct: 47  VMTSQGFSVNTTPIRPEGYDTLIVSGYLEFRLPEA-----------NLLELVKAASAQSR 95

Query: 111 HIAAACIGTFVLAEAGVLDHQKATTTWWLATLFRQRYPAVQLEDSRMLVSSSHLVTAGAA 170
            +A+ C+G FVLAEAG+L+ ++ TT W  A  FR+RYP ++LE+ ++ +   H+ T    
Sbjct: 96  RVASLCMGIFVLAEAGLLEGKRTTTHWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGM 155

Query: 171 LSHVDMALWIV-RQASPELATLVARYLIVDSRPSQSAYVISDHLSHSDPLVERFE---RW 226
            + VD+AL +V      +LA  +AR L++  R       +S  L   DP  +R +    +
Sbjct: 156 SAGVDLALAMVENDLGSDLARRIARKLVIAQRRGSEQSQLS-ALLELDPKSDRVQLALAY 214

Query: 227 ARGRLALGFSLDEAAQAAGTSKRTLARRMQQVLGKSPLSYVQDLRVERAVHLLKTSDKSL 286
           AR  L    S++  A  A  S R  +R  ++  G++P   ++ LRVE A  +++TS   +
Sbjct: 215 ARENLTHDLSVEALADVARLSPRQFSRVFREETGQTPAKAIESLRVEAARAMMETSRHPV 274

Query: 287 EQIAGMVGYADGVTLRTLLRQRLGR 311
           E +A   G+ D   +R    +  G+
Sbjct: 275 EVVARETGFGDRERMRQAFLRAFGQ 299