Pairwise Alignments

Query, 241 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 271 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  126 bits (316), Expect = 5e-34
 Identities = 79/232 (34%), Positives = 114/232 (49%), Gaps = 6/232 (2%)

Query: 7   AYEAPRVTGYHAHEDGQLFALREGLQVIETPSGRWVQPPGWIGWIAPRCAHAAQSFGPTA 66
           AY AP     H H  GQL     G+         W  PP    WI     H      P  
Sbjct: 42  AYNAP-----HTHRHGQLLYAVSGVMRAVAQGSLWFLPPKRALWIPAEEEHDQLMLTPVQ 96

Query: 67  GWSLHIDSQAAAVLPDGPHVFAVTPLVLGLVDRLTSLDASAGSLDARRARLVGVLIDELA 126
             S++I + AAA   D   +  V+ L+  L+  L + +     L+ R + +V +++ ELA
Sbjct: 97  MRSIYIQADAAAGFGDRCRIVDVSLLLRELILVLAN-EPIEYELEGRNSHVVALILSELA 155

Query: 127 ASERLSLHLPMPQDKRLAMMAAALANDPSLPDTIDDWADRIGVARRTLTRRFAAETGLSF 186
           A+  L L +P P D+RL ++  A+   P     ++ WAD++G + RTL R F  ETGL++
Sbjct: 156 AARTLPLQIPWPVDRRLLVVCRAILEAPGQTHRVEYWADQVGASSRTLIRLFLKETGLTY 215

Query: 187 AQWRQQARLLKAVELLSLKEPVTVVALTVGYNSVSAFIEAFRKHFGRTPSRF 238
            QW QQ RL  A+E L   EP+  +A  +GY S SAF   FR+  G +P  F
Sbjct: 216 RQWVQQVRLACALERLENGEPIGRIAQDLGYVSASAFSAMFRRAIGVSPRDF 267