Pairwise Alignments

Query, 330 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

Subject, 321 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

 Score =  244 bits (622), Expect = 3e-69
 Identities = 129/317 (40%), Positives = 192/317 (60%), Gaps = 3/317 (0%)

Query: 12  VLASLTCIAALLPGMAFAQNGYPAKPIRVIVPFAAGSTTDIIARAIADKMGASMGQVLVI 71
           VL ++  IAA  P + +A   +P KPIR++VP+AAG   D  AR +A ++ A++GQ +VI
Sbjct: 7   VLKTIAAIAACAPLLGWA--AWPDKPIRMVVPYAAGGGADNTARIVAQQLSAALGQQIVI 64

Query: 72  DNRGGASGTIGQQAVATAAPDGYTLMIHSSSHTVSPSTFAKLPFDTVHDFAGVTPISSLP 131
           DNR GA G IG   VA AA DGYT++  +S+ +V+PS   KLPFD   DF  V+ +++ P
Sbjct: 65  DNRPGAGGVIGADNVAKAAADGYTVLYDASAFSVNPS-LRKLPFDAAKDFIPVSLVATAP 123

Query: 132 NALVIAPSKNIKTLPQLLAAARAKPGSMNFASAGQGSATHLNAEKFKLAAKIDATNIPFK 191
             LV+  +   KT+ + L  AR  PG ++FASAG G+ +HL  E     AK++  ++P+K
Sbjct: 124 QILVVPENAPYKTVAEFLDFARKNPGKLSFASAGGGTGSHLAGEALNEQAKVNLMHVPYK 183

Query: 192 GSGEAVTEVLSGRVDYYFSPIAPVIGQIKEGQLLALAVGSPKRAAALPDVPTTTEAGVPG 251
           G   A+T+++ G+V  YF  +A  +  +K G+L ALAV S KR  ALPD PT  E+G+PG
Sbjct: 184 GGAPALTDLMGGQVSAYFGNVASTLSYVKSGKLRALAVSSTKRVPALPDTPTLGESGLPG 243

Query: 252 SEFNFWIGMMAPAKTPRDIVERLHAEVTKALATPEVKERFAKLGADPWTLKPAQFDAYIK 311
                W G+  P  TP DIV++L   V  A+  P V ++  +LG +P    P  F  +++
Sbjct: 244 YNVVEWNGVFLPKGTPADIVQKLGKAVQAAINDPTVHQKLLQLGLEPAGTTPEAFARFVQ 303

Query: 312 EEIASNAELVKAAGLSV 328
           +EI   + LV+A  + V
Sbjct: 304 DEIGRVSALVRARNIRV 320