Pairwise Alignments

Query, 257 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score =  119 bits (299), Expect = 5e-32
 Identities = 71/256 (27%), Positives = 134/256 (52%), Gaps = 10/256 (3%)

Query: 7   LSPALRPFLLILMLLVLWDLAIRLFKIPAYLIPPPWEVVK---QLVAE---WPHLLAESW 60
           L+  L P+ L ++LL +W LA+    +   ++P P  VV    +LV     W HL    W
Sbjct: 9   LTQRLAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISGW 68

Query: 61  KTTLATLGGFGLTILIGIPIAMVIAYSRVVESYVYPLLVFSQSIPKVAIAPLFVVWFGFG 120
           +  L  + G  + +++G    +     R+++S V  +    +++P +A+ PL ++WFG  
Sbjct: 69  RAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMI----RNVPHLALIPLVILWFGID 124

Query: 121 IFPKVISAFLLGFFPVVVSTVMGFKSVEPDMLDLSRSMGASRLQTFFKISLPQALPQIFS 180
              K+    L   FP+ ++T  G ++V+P +++++RS G S    F ++ LP ALP I  
Sbjct: 125 ESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSILV 184

Query: 181 GLKVSVTLAVVGAVVGEFVGSNSGIGYVLQVANGNFDLPLMFAALVVLSSIGVILFVAVD 240
           G++ ++    +  +V E + +N+GIGY+   A       ++  A+V+ + +G I  +A  
Sbjct: 185 GVRFALGFMWLTLIVAETISANAGIGYLAMNAREFLQTDVVVLAIVLYAVLGKIADLAAR 244

Query: 241 LVERVMIPWHASQRHA 256
            +ERV + WH + + A
Sbjct: 245 GLERVWLRWHPAYQVA 260