Pairwise Alignments

Query, 333 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 342 a.a., Riboflavin-binding protein RibY from Xanthobacter sp. DMC5

 Score =  339 bits (869), Expect = 7e-98
 Identities = 170/323 (52%), Positives = 225/323 (69%), Gaps = 1/323 (0%)

Query: 11  AAALATFAIAPAQAQGDKPKDKVTLMLNWYLYSEHAPFFLGKEKGFYADEGIDLDIQEGR 70
           A  LAT +  PA AQ  K  DK  LMLNWY+Y EHAPF LG +KG+YA+EGIDLDIQEGR
Sbjct: 21  ALGLATASTLPAAAQASKTPDKAVLMLNWYVYGEHAPFILGLKKGYYAEEGIDLDIQEGR 80

Query: 71  GSAVTAQAVAAKSATFGYIDVTTMIKAAAKGAPLKSTGVLFQVSPMSVMGFSEKNIKTPK 130
           GSAVT QAV A +ATFG  D+  MIKA AKGAP+K+ GVL Q +P +V+   E  I  PK
Sbjct: 81  GSAVTIQAVGAGTATFGLADIGVMIKAVAKGAPVKTIGVLLQRTPGAVVA-PEGKINGPK 139

Query: 131 DIIGKTVAVTPGDSMSQMWPLFLKVNDIKPDQVKIVSGDGQTKLNAVTNGQADLLLGYVM 190
           D+ GKT+  TPGD+++ +WPL+LK   I    VK+V+ D Q KLNAV N QAD L+G+  
Sbjct: 140 DLPGKTIMFTPGDAVTPIWPLYLKKLGIPEGAVKMVAADAQAKLNAVVNNQADGLIGFTT 199

Query: 191 DQAIKLQDATGKPVTPIRFADSGVNQISSGIITNKNLLTENPDLVKRFMRASTKAAEAAE 250
           +Q  +L D   KPVT +R+ D+GVN +S GI+ N + LT+  D+VKRFMRA+T+A E AE
Sbjct: 200 EQGARLPDIMNKPVTMLRYTDAGVNLVSLGIVANTDTLTKRADMVKRFMRATTRAVEEAE 259

Query: 251 KSPEAAVDAMLKANAKAGVRDTLIVGMKQSVALYHTKETANQRPFRVTMKNVSDSLDLLV 310
           K+P+AA+D +++A  K G+ D  +  ++ S ALY   +  + RPFR+    + +SL++L 
Sbjct: 260 KNPKAAIDILMEAYPKIGLPDAQLRSLQYSQALYRASDDKSTRPFRMNPALMDESLEILT 319

Query: 311 QYGGMDASTRGKPEDYVTLDFLP 333
           QYGG+D S R K +DY TL+FLP
Sbjct: 320 QYGGLDPSARSKAQDYFTLEFLP 342