Pairwise Alignments

Query, 333 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 323 a.a., taurine ABC transporter periplasmic binding subunit from Pseudomonas putida KT2440

 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 18/278 (6%)

Query: 64  LDIQEGRGSAVTAQAVAAKSATFGYIDVTTMIKAAAKGAPLKSTGVLFQVSPMSVMGFSE 123
           +D ++    A    AVA+     GY+  + +  AA +  P+++  +  Q+     +  + 
Sbjct: 55  IDWRKFDNGADVITAVASGDVQIGYLGSSPLAAAATRKLPVETFLIATQIGAGEAL-VAR 113

Query: 124 KNIKTPKDIIGKTVAVTPGDSMSQMWPLFLKVNDIKPDQVKIVSGDGQTKLNAVTNGQAD 183
            +IK+P+D+IGK VAV    +        LK  +I P +V+I++      + A   G  D
Sbjct: 114 DSIKSPQDLIGKKVAVPFVSTGHYSLLAALKSWNIDPSKVQILNLAPPAIIAAWKRGDID 173

Query: 184 LLLGYVMDQAIKLQDATGKP-VTPIRFADSGVNQISSGIITNKNLLTENPDLVKRFMRAS 242
               YV D A+ +    GK  +T    A  G     + I+  K+   ++PD+VK F + +
Sbjct: 174 AT--YVWDPALGVAKENGKVLITSGELAQKGAPTFDAWIV-RKDFAEKHPDVVKAFAKVT 230

Query: 243 TKAAEAAEKSPEA------AVDAMLK-ANAKAGVRDTLIVGMKQSVALYHTKETANQRPF 295
             A     K P+A       VD ++K + AKA     L+ G    +A    +  A   P 
Sbjct: 231 LDAYADYRKDPKAWLADKGNVDKLVKLSGAKASDIPVLLEGNVYPLAA--DQANALGAP- 287

Query: 296 RVTMKNVSDSLDLLVQYGGMDASTRGKPEDYVTLDFLP 333
             T + ++D+ + L Q G ++A        YV+  FLP
Sbjct: 288 --TTQALTDTANFLKQQGKVEA-VLPDYSPYVSAKFLP 322