Pairwise Alignments

Query, 259 a.a., Hydroxymethylpyrimidine ABC transporter, ATPase component from Variovorax sp. SCN45

Subject, 282 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  197 bits (502), Expect = 2e-55
 Identities = 109/239 (45%), Positives = 145/239 (60%), Gaps = 10/239 (4%)

Query: 9   ARGVSKIYQSKDGPVESLKPIDFAIKEGEFVSVVGPSGCGKSTLLKMVAGLLPISGGSLT 68
           A  V K Y +      +L  +  AI+ GEFVS++GPSGCGKSTLLKM AGL   S G + 
Sbjct: 28  ANQVEKTYSNG---THALSRVKLAIERGEFVSLLGPSGCGKSTLLKMFAGLEQPSAGHVR 84

Query: 69  LAGKPIKG-------PQKDVGIVFQSAVLLPWRSVEDNILLQAEMRHLPMDAARARAREL 121
             GK   G       P + + +VFQ A L+PW  V DN+ L  ++   P   ++ + +  
Sbjct: 85  WWGKDAPGTDHHAGTPGRSLAMVFQEATLMPWAKVHDNVRLPLDLAGAPKAQSQLKVQAA 144

Query: 122 MEMAGLKGFGGKYPWQLSGGMQQRASICRALLHDPSVLLMDEPFGALDAMTREKMNLELQ 181
           +E+ GL  FG  YP +LSGGMQ RASI RAL  +P++LLMDEPFGALD  TR K++ +L+
Sbjct: 145 LELVGLGKFGDVYPRELSGGMQMRASIARALATEPNLLLMDEPFGALDEFTRNKLDSDLR 204

Query: 182 RIWMASKKTVMLITHSIPEAIFLSDRVIVMSERPGSIAAVYDIDLPRARTLDMMASPEF 240
           ++W+    TV+ +THSI EA++LS RVIVM  RPG + A   ID P  R      SP F
Sbjct: 205 QLWLKRDLTVVFVTHSIFEAVYLSSRVIVMGARPGRVIADVIIDGPLERDEAYRTSPAF 263